WormBase Tree Display for Variation: WBVar00012244

WBVar00012244 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00012244
    Other_name: cbs10624
      cb10624 Paper_evidence: WBPaper00055507
    HGVSg
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc3857a
    Flanking_sequences: aagcgcaggtggccttcgattagag gtttacggtatttgttttgccaaac
    Mapping_target: cb25.fpc3857a
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: CAC HindI 199 100 86 69 67 61 51 44 38 35 32 30 23 23 23 21 19 18 17 11 10 8 6 3 2 2 2
      Polymorphic_strain_digest: CAC HindI 199 100 86 69 61 51 51 44 38 35 32 30 23 23 23 21 19 18 17 16 11 10 8 6 3 2 2 2
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00035201
      WBGene00035202
    Transcript: CBG14809c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        Intron_number: 5/11
      CBG14809f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        Intron_number: 3/9
      CBG14810.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        Intron_number: 5/6
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: CrossMatch, Polybayes, ssaha-SNP v1.0, ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP