WormBase Tree Display for Variation: WBVar00009811
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| WBVar00009811 | Name | Public_name | WBVar00009811 | ||
|---|---|---|---|---|---|
| Other_name | pas13559 | ||||
| haw16413 | |||||
| haw123874 | |||||
| cewivar00076323 | |||||
| CE54533:p.Tyr96Asp | |||||
| T27A1.1.1:c.286T>G | |||||
| HGVSg | CHROMOSOME_II:g.503468A>C | ||||
| Sequence_details | SMap | S_parent | Sequence | T27A1 | |
| Flanking_sequences | gcactgggcgtgttcacaaaacttttccgtccaggatgatcaccgtgatccatagacttccctaaagtcccttgtggtaccatgcaccactactattactactactgaaataaaactggaatttcaaaaaaggaaccccaaaaaaaaagaaaaaaaatacgatttgtcttccagttttgaatatccaaattccggtgtatccaaggctccagccactctcgactttcgtagaacaaaagaccattccgtaaatgacaacgatcggaatgtgccctccgcttctccagaaatatgcagagt | ggtttccattgagacatcagaattgagtatgtaggcttcctgaaggaaacaaaacggttaatatcactttgttatcggatttttgactgacaagatgtctactaggtaggcacaactggctcggaaataaatcaacgactttcttttttgttaaaggcggagtaccgaaatctgggaagtatttttaattgactccaaattttcccccgaatatctatgtgaaaaaactcaaaaaaaaatcccctgattttatattatttattgaaattgcgatttttatttcgtgacccaaggctgatt | |||
| Mapping_target | T27A1 | ||||
| Type_of_mutation | Substitution | A | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (15) | |||||
| Laboratory | AX | ||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar01357986 | |||
| WBVar00163163 | |||||
| WBVar01291920 | |||||
| WBVar00543739 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00005324 | |||
| Transcript | T27A1.1.1 | VEP_consequence | missense_variant | ||
| VEP_impact | MODERATE | ||||
| HGVSc | T27A1.1.1:c.286T>G | ||||
| HGVSp | CE54533:p.Tyr96Asp | ||||
| cDNA_position | 286 | ||||
| CDS_position | 286 | ||||
| Protein_position | 96 | ||||
| Exon_number | 3/4 | ||||
| Codon_change | Tac/Gac | ||||
| Amino_acid_change | Y/D | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
