WormBase Tree Display for Variation: WBVar00009666
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| WBVar00009666 | Name | Public_name | WBVar00009666 | ||
|---|---|---|---|---|---|
| Other_name | pas13530 | ||||
| cewivar00120090 | |||||
| W07E6.2a.1:c.585-70A>T | |||||
| HGVSg | CHROMOSOME_II:g.483172T>A | ||||
| Sequence_details | SMap | S_parent | Sequence | W07E6 | |
| Flanking_sequences | aaaaaatattttcaagatttttcacaacttttcctgcaaaaagttacctgagatccggaataaataagtccttcgcctccccaacgcagacaggtgaccgaagcagtgtgtccactcaaacagcgaactacagtaccctgtacggtatcccaaatgaaaatatttccgtcttttccacaagaagccagaagcctgcacgtcgggtctttgtgcatcggttgccatgccaaactgcaaaaattttattataaaaattcgatttgaaatggaaatgtttagtttttatgttgaaaaattaat | tttggctaatatttgagagaaaaactcgggttttctgaagctttctgttaaaaatcacatttttccactatggatgataagtaaactcatagaaaatattaaaaattcgatttaaaatacccaaattattggaattcgaaatgggtctgctagactacaaattacaaatttcgatttagcagacccaagtggttttgaagaagtttgggtctgctagactacaaactacaactttcgatttagcagacccaagtgattttgaagtgattgggtctgctagactacaaactagaaatttcg | |||
| Mapping_target | W07E6 | ||||
| Type_of_mutation | Substitution | T | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
| WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00021074 | |||
| Transcript | W07E6.2a.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | W07E6.2a.1:c.585-70A>T | ||||
| Intron_number | 4/8 | ||||
| Method | WGS_Pasadena_Quinlan |
