WormBase Tree Display for Variation: WBVar00009651
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| WBVar00009651 | Name | Public_name | WBVar00009651 | ||
|---|---|---|---|---|---|
| Other_name | pas13527 | ||||
| haw16367 | |||||
| haw123843 | |||||
| cewivar00076251 | |||||
| W07E6.2b.1:c.170+129T>A | |||||
| W07E6.2a.1:c.1196+129T>A | |||||
| HGVSg | CHROMOSOME_II:g.481275A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | W07E6 | |
| Flanking_sequences | ggaatcggcggatccggagacgagaagacgactgtcggcagaccatgcaacttgatagactgggccaacgtgtcctctgaaaaattgtaaatttaaggaagttttcggctgaaaaattatttgacccattttcaagtgagaattctcgaaaatcgttcgaaatttgtagattgtagtctagcagacccaaccactcgggtctgctaaatcgaaatttgtagtttgtagttcatttttagtgcataaaggaggaattttgctgtacgaaatttgttttcctgttttaggctcaaagtaggt | attctgactgaaaattgtgtgtttcgtgttttccaatactaaaaatgtcatttttgaaagaaaaactgctattttagatcattttaaggaacttttcagggatttctcggtaatttctgcatttctacctcaaagaagccaaatattttccagttcttccacaccagagcttcactgatttgtcgaatgaggcggaggcgatataacgtgtatccggtgagaaaacgacttgattcaccaattgcatgtgtccggtcattcgattaatcgattgtttcgtctctttcgggttccacataa | |||
| Mapping_target | W07E6 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (13) | |||||
| Laboratory | AX | ||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar00163117 | |||
| WBVar01357920 | |||||
| WBVar00543708 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00021074 | |||
| Transcript | W07E6.2b.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | W07E6.2b.1:c.170+129T>A | ||||
| Intron_number | 1/1 | ||||
| W07E6.2a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W07E6.2a.1:c.1196+129T>A | ||||
| Intron_number | 7/8 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
