WormBase Tree Display for Variation: WBVar00008630
expand all nodes | collapse all nodes | view schema
WBVar00008630 | Name | Public_name | WBVar00008630 | ||
---|---|---|---|---|---|
Other_name | haw82824 | ||||
cewivar00242570 | |||||
CE45432:p.Ala118= | |||||
CE47766:p.Ala81= | |||||
C54D10.8a.1:c.354G>A | |||||
C54D10.8b.1:c.243G>A | |||||
HGVSg | CHROMOSOME_V:g.12446513C>T | ||||
Sequence_details | SMap | S_parent | Sequence | C54D10 | |
Flanking_sequences | tttttaggagttgcttttcatgatt | gctttattatttctcattatctcct | |||
Mapping_target | C54D10 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00008302 | |||
Transcript | C54D10.8a.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | C54D10.8a.1:c.354G>A | ||||
HGVSp | CE45432:p.Ala118= | ||||
cDNA_position | 393 | ||||
CDS_position | 354 | ||||
Protein_position | 118 | ||||
Exon_number | 4/8 | ||||
Codon_change | gcG/gcA | ||||
Amino_acid_change | A | ||||
C54D10.8b.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | C54D10.8b.1:c.243G>A | ||||
HGVSp | CE47766:p.Ala81= | ||||
cDNA_position | 243 | ||||
CDS_position | 243 | ||||
Protein_position | 81 | ||||
Exon_number | 3/6 | ||||
Codon_change | gcG/gcA | ||||
Amino_acid_change | A | ||||
Remark | [20081124 db] this Variation was previously named hw82824 | ||||
Method | WGS_Hawaiian_Waterston |