WormBase Tree Display for Variation: WBVar00008615
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WBVar00008615 | Name | Public_name | WBVar00008615 | ||
---|---|---|---|---|---|
Other_name | haw82821 | ||||
cewivar00242568 | |||||
C54D10.8a.1:c.413T>C | |||||
CE47766:p.Phe101Ser | |||||
C54D10.8b.1:c.302T>C | |||||
CE45432:p.Phe138Ser | |||||
HGVSg | CHROMOSOME_V:g.12446454A>G | ||||
Sequence_details | SMap | S_parent | Sequence | C54D10 | |
Flanking_sequences | attagcagcttgttgtttcttcaaa | atgtcatttcatcttctttaaaact | |||
Mapping_target | C54D10 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00008302 | |||
Transcript | C54D10.8a.1 | VEP_consequence | missense_variant | ||
VEP_impact | MODERATE | ||||
HGVSc | C54D10.8a.1:c.413T>C | ||||
HGVSp | CE45432:p.Phe138Ser | ||||
cDNA_position | 452 | ||||
CDS_position | 413 | ||||
Protein_position | 138 | ||||
Exon_number | 4/8 | ||||
Codon_change | tTt/tCt | ||||
Amino_acid_change | F/S | ||||
C54D10.8b.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | ||||
HGVSc | C54D10.8b.1:c.302T>C | ||||
HGVSp | CE47766:p.Phe101Ser | ||||
cDNA_position | 302 | ||||
CDS_position | 302 | ||||
Protein_position | 101 | ||||
Exon_number | 3/6 | ||||
Codon_change | tTt/tCt | ||||
Amino_acid_change | F/S | ||||
Remark | [20081124 db] this Variation was previously named hw82821 | ||||
Method | WGS_Hawaiian_Waterston |