WormBase Tree Display for Variation: WBVar00007396
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WBVar00007396 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00007396 | |||
Other_name | pas13076 | ||||
cewivar00018179 | |||||
T24C4.7.1:c.-56C>A | |||||
HGVSg | CHROMOSOME_III:g.895660G>T | ||||
Sequence_details | SMap | S_parent | Sequence | T24C4 | |
Flanking_sequences | attccgatcattggctatactcaacgggtcgtactctatatattcgtcatcatcctgaaaaagacttgatgtttcaaacaaaaaaagaacaaattgattaccgcaaagatcacttcctctccgtcgacaactgcgatttctgcttgaatttcgtcgccggtgactactattacattctcttccagttcaatcggttcttccgaattttcatttacttctacagattttgaagtcgatggcagcattttttaagaaaaaactatggcgttttaaaaatatgcgagagacaaattttatgtc | gaattcaaaatgttctcccgtgtctgcgtctaggctctctactctcccttgcagacagagcgtacttccacacctctcggaaaacagcaagaatatttattttcattattttcattatcaaacacatgcactcagcaaaaaatgaaaaatgcaatgcctgtggcggttaccgattttccgttaatgacggattcaaatattgcgatagatgtggcgctttatttgaggtatattaaaacaaatttaataaatctcgattcatcttaaaagcatttcagaattttgaagagcttgaggaag | |||
Mapping_target | T24C4 | ||||
Type_of_mutation | Substitution | G | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (78) | |||||
Laboratory | QX | ||||
Person | WBPerson6900 | ||||
WBPerson1730 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01443366 | |||
Status | Live | ||||
Affects | Gene | WBGene00020763 | |||
Transcript | T24C4.7.1 | VEP_consequence | 5_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | T24C4.7.1:c.-56C>A | ||||
cDNA_position | 53 | ||||
Exon_number | 1/10 | ||||
Reference | WBPaper00040707 | ||||
Method | WGS_Pasadena_Quinlan |