WormBase Tree Display for Variation: WBVar00007281
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| WBVar00007281 | Evidence | Paper_evidence | WBPaper00040707 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00007281 | |||
| Other_name | pas13053 | ||||
| oicr_ce1155 | |||||
| cewivar00018130 | |||||
| T24C4.6a.2:c.*111T>C | |||||
| T24C4.6a.1:c.*64T>C | |||||
| CE39415:p.Leu847Pro | |||||
| T24C4.6b.1:c.2540T>C | |||||
| HGVSg | CHROMOSOME_III:g.882029A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | T24C4 | |
| Flanking_sequences | aactttgatttcagtgattcctgaacagcaactaacacagatttgggtgaaaagtggtttaaattgtatgagaagaaagaagaggagcggtgcttacccgatagaaaataacagaaatgaaagaaaacttttataggattcaggacaaagccctagtactccattggaagagcataatcatcaaaatcgacattgacaaagtcttgaacctcttcatctgcctcaacgtctccttcatcttcttcctcgacatctgacacataacttggaacaaatgttggagaattcgaggaatgtgct | gatcggcaggaattgatttcggattgcgtctgtaataaaacatcagattagtcgtctaacactgaaaagtacccacatggggggaggaagagcagacgtcaagacagctatcaatactcatcgtcaccatcatcggcaggatcacgagacctcttttgaggtcggatcgccgctttccgagctctacaacactgtttttgttaagagtttcacccaatttatctctaatgtttatggggttattcaagtatgtcgcgaaatgtattaaaaatccatcaaaacgaaatatctcatagcgca | |||
| Mapping_target | T24C4 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (86) | |||||
| Laboratory | QX | ||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_Stein | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar00602736 | |||
| WBVar01443348 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00020762 | |||
| Transcript | T24C4.6a.1 | VEP_consequence | 3_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | T24C4.6a.1:c.*64T>C | ||||
| cDNA_position | 2670 | ||||
| Exon_number | 9/9 | ||||
| T24C4.6b.1 (12) | |||||
| T24C4.6a.2 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T24C4.6a.2:c.*111T>C | ||||
| cDNA_position | 2721 | ||||
| Exon_number | 8/8 | ||||
| Reference | WBPaper00040707 | ||||
| Method | WGS_Pasadena_Quinlan |
