Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar00006456

expand all nodes | collapse all nodes | view schema

Name Class

WBVar00006456NamePublic_nameWBVar00006456
Other_namepas12888
cewivar00017845
F42G9.9c.1:c.66+1497C>T
F42G9.9b.1:c.66+1497C>T
F42G9.9a.1:c.66+1497C>T
F42G9.9d.3:c.-379+1497C>T
HGVSgCHROMOSOME_III:g.766762C>T
Sequence_detailsSMapS_parentSequenceF42G9
Flanking_sequencesctcccttccgtagtcataatcactttgtttgtctctaggtgtctttgtcagtagttgattatccctctgatgccttccgtgagtagttttttgtctatctctcaacccgccgtgaggcagcttcttgatttattgacataacgaagcaagagagggagacagcaagagacaaaaaatcagatcatcggtttttttttgtttgaattgtttgaattcgagtttcacgagcccagttcgacttccaagcacgcacgattttacaattcttgttgtagtttgacaaaatttgcttttcatgtgttttttttgtctcctgcctgtttctccttattcttcgtcgtcttcacatttgaattaggagaaacgaattgcaatgaattgagtggtttgtccttagtaaaatagcgcatgtccctgtgagacttgggcaaataagtgtcgcgccacagaaagaccttcctcttccgaagacagtaatcatcgtccgggtgggatccatcacatccactagtttgagtgttcacctatgtttaattttcccctgcctttttgggttagtcaagttaggaaaatactgagtgagacagttttcatattact
Mapping_targetF42G9
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (106)
LaboratoryQX
AX
PersonWBPerson6900
WBPerson1730
AnalysisWGS_Pasadena_Quinlan
WGS_De_Bono
Million_mutation_project_reanalysis
WGS_Andersen
HistoryAcquires_mergeWBVar01322363
WBVar01443264
StatusLive
AffectsGeneWBGene00004212
TranscriptF42G9.9c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF42G9.9c.1:c.66+1497C>T
Intron_number2/8
F42G9.9a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF42G9.9a.1:c.66+1497C>T
Intron_number2/9
F42G9.9b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF42G9.9b.1:c.66+1497C>T
Intron_number2/8
F42G9.9d.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF42G9.9d.3:c.-379+1497C>T
Intron_number1/7
ReferenceWBPaper00040707
WBPaper00037807
MethodWGS_Pasadena_Quinlan