WormBase Tree Display for Variation: WBVar00006120
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WBVar00006120 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name (3) | |||||
Sequence_details | SMap | S_parent | Sequence | C52E4 | |
Flanking_sequences | aatttattattgcgagaattttgaa | ttctgccagaaaaaggatggtttca | |||
Mapping_target | C52E4 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00589716 | |||
Status | Live | ||||
Affects | Gene | WBGene00003235 | |||
Transcript | C52E4.2a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C52E4.2a.1:c.184-32G>A | ||||
Intron_number | 5/7 | ||||
C52E4.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C52E4.2b.1:c.94-32G>A | ||||
Intron_number | 2/3 | ||||
C52E4.2a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C52E4.2a.2:c.184-32G>A | ||||
Intron_number | 4/6 | ||||
C52E4.2c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C52E4.2c.1:c.247-32G>A | ||||
Intron_number | 4/5 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw82322 | ||||
Method | WGS_Hawaiian_Waterston |