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WormBase Tree Display for Variation: WBVar00006120

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Name Class

WBVar00006120EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00006120
Other_namehaw82322
haw169851
cewivar00241956
C52E4.2a.1:c.184-32G>A
C52E4.2a.2:c.184-32G>A
C52E4.2c.1:c.247-32G>A
C52E4.2b.1:c.94-32G>A
HGVSgCHROMOSOME_V:g.11977180C>T
Sequence_detailsSMapS_parentSequenceC52E4
Flanking_sequencesaatttattattgcgagaattttgaattctgccagaaaaaggatggtttca
Mapping_targetC52E4
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00023072From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00589716
StatusLive
AffectsGeneWBGene00003235
TranscriptC52E4.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC52E4.2a.1:c.184-32G>A
Intron_number5/7
C52E4.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC52E4.2b.1:c.94-32G>A
Intron_number2/3
C52E4.2a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC52E4.2a.2:c.184-32G>A
Intron_number4/6
C52E4.2c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC52E4.2c.1:c.247-32G>A
Intron_number4/5
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw82322
MethodWGS_Hawaiian_Waterston