WormBase Tree Display for Variation: WBVar00004086
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| WBVar00004086 | Evidence | Paper_evidence | WBPaper00040707 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00004086 | |||
| Other_name | pas12414 | ||||
| cewivar00066877 | |||||
| CE43975:p.Ala263= | |||||
| Y18H1A.10.1:c.789T>A | |||||
| HGVSg | CHROMOSOME_I:g.685714A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y18H1A | |
| Flanking_sequences | aaattgtggagcatctggtccttcaaaaatcgtcgtatcctcttccaaatcccagtagatagttgtcgaatctaaaattatatatttttaattataaattgtatatttttttaatttaaaaaataacaaacctttcgaaatgcggctaagtgtgaaatcaataatattgaccttaattccatgggtcctcagtggaattttctgcccatgcacagtgtaggagagctcttccactccgttccgatcgatcagcacattactaagatttaagtccctgtgctcgaattcaagagctgcttc | gctgcaaccattgagagaacgagctggtgaatgatggaaaatagttcatcttcactttcaaggacaaaatctgccagcgagattccaccatttgccgagacgaaaaggataaagttttgatgttctgaagaataaacatctggcctcaaatgttcggattcattgagcttatcgtaggcatcccaagctctcagtaatcccttaggatattcccccatgactatttgggctgaaatcatttcgataaaattcggcgtagaattccaagaatttgggtctctcaacgccgacagttccttc | |||
| Mapping_target | Y18H1A | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (63) | |||||
| Laboratory | QX | ||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01429864 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00021214 | |||
| Transcript | Y18H1A.10.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | Y18H1A.10.1:c.789T>A | ||||
| HGVSp | CE43975:p.Ala263= | ||||
| cDNA_position | 813 | ||||
| CDS_position | 789 | ||||
| Protein_position | 263 | ||||
| Exon_number | 3/7 | ||||
| Codon_change | gcT/gcA | ||||
| Amino_acid_change | A | ||||
| Reference | WBPaper00040707 | ||||
| Method | WGS_Pasadena_Quinlan |
