WormBase Tree Display for Variation: WBVar00003936
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| WBVar00003936 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00003936 | |||
| Other_name | pas12384 | ||||
| haw915 | |||||
| cewivar00066746 | |||||
| Y65B4A.2b.1:c.40+2127G>T | |||||
| HGVSg | CHROMOSOME_I:g.640375G>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y65B4A | |
| Flanking_sequences | gaaggccagcaccccgtgttaacatttaaaaattacaagatttgccccctcaaacatccctggaaaaactagaaaaacctcgtgtgcttgcctgacaacagctgttcaccgacaaaaagatgacggggagggcttcaacagagcttgtgtttcctcgtcaactctttcgagaactgacagcacttttcatataactcatcactaactttcgctgctcgtggcggttttttttagttccccagtaatgagtcaattttgtctgttgctcagaactctcaattaccgatgctattagcggaa | gacttttggagcgccggagccagagcaaaattcatttttatttgaaaaatgagtgatgagtttttctctctgtttttccatgtttttctcgttattaggctgtaactttccacatacacttggtgtcagagagtcccatcacggtttgatctacaataaaagtgtgacgtcagcacgttcttaaccttgtgacaatagttgaaaaatctgcgtctcgtttcccgcatttttgtagatcacaccgtgatgggactctctaacaccacgtacacatgaaaatttcgctgagaacaaattttt | |||
| Mapping_target | Y65B4A | ||||
| Type_of_mutation | Substitution | G | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (29) | |||||
| Laboratory | AX | ||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar00147665 | |||
| WBVar01287518 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00022026 | |||
| Transcript | Y65B4A.2b.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y65B4A.2b.1:c.40+2127G>T | ||||
| Intron_number | 2/8 | ||||
| Reference | WBPaper00037807 | ||||
| Method | WGS_Pasadena_Quinlan |
