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WormBase Tree Display for Variation: WBVar00003616

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Name Class

WBVar00003616EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar00003616
Other_namepas12320
cewivar00119421
Y65B4BR.4b.1:c.805-259A>C
Y65B4BR.4a.1:c.805-259A>C
Y65B4BR.12:n.109A>C
HGVSgCHROMOSOME_I:g.539194A>C
Sequence_detailsSMapS_parentSequenceY65B4BR
Flanking_sequencesagagatccgagaggaagagtgagttttccggcggaaaaagcagatttagcacgagaaaagcgtttctgattatatttttgatgcgaaaatcatcaaaattaaaaatatctaccgtagccgcggatacctggaccaaaatgccgaaaaaagtgacctgataaattattttaaggctaaaatcttgatttttacataattagtgtcttatttttgttgatttcttgtcaaatttttgtaattgcatcgaaataggccaaaaataaagtaaaaatcaacttccaacacagaaaaactgacaaattgaagatttttgctgaattcaggcaatttttcgtaattttgatcctccataattttttttttcgagaaaattttgaaattttttctttaaatacggcctgaaaattaggaaattataacgacggataaaaaattctgattttctttattttaaccaaggtctccaattatttgataatcgaaaaaaaaaaaactttccagtgatttttacttgaaaaatgtctaaaaattcacgccaggtgcacaatccattttcaggtgtattacgtggatcacaacacgcgcacgaccacctggcaa
Mapping_targetY65B4BR
Type_of_mutationSubstitutionAC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (56)
LaboratoryQX
PersonWBPerson6900
WBPerson1730
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
WGS_Andersen
HistoryAcquires_mergeWBVar01429829
StatusLive
AffectsGeneWBGene00007009
WBGene00220191
TranscriptY65B4BR.12VEP_consequencenon_coding_transcript_exon_variant
VEP_impactMODIFIER
HGVScY65B4BR.12:n.109A>C
cDNA_position109
Exon_number1/1
Y65B4BR.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY65B4BR.4a.1:c.805-259A>C
Intron_number5/11
Y65B4BR.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY65B4BR.4b.1:c.805-259A>C
Intron_number5/11
ReferenceWBPaper00040707
MethodWGS_Pasadena_Quinlan