WormBase Tree Display for Variation: WBVar00002451
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| WBVar00002451 | Name | Public_name | WBVar00002451 | ||
|---|---|---|---|---|---|
| Other_name | pas12087 | ||||
| cewivar00066024 | |||||
| F56C11.1.1:c.298+15C>T | |||||
| F56C11.1.2:c.298+15C>T | |||||
| HGVSg | CHROMOSOME_I:g.153380G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | F56C11 | |
| Flanking_sequences | agatcttaatgaggacacccatggctgggtggtaccatagatgaatgatccatcaatccatgaagtccgttcattgatttgttctcgaggtgagttgagcccatttccagttgctttatcgtatttggcacgtgtaaatgggatttctgtctttccctcacattctttatcaaatacattatcacataggggtacttgaattttaagtgtctctagtggacaggatactccatttgattgcattatttcataagcaactacttgacctataattattattactaatttttgaggtagagg | caataaaaacgaactgaaaaatgccaataaagtcgtgcatcctcttgtattaggtataccggactctcctttgaatagtatatcggagagttcacgggcggacggaagtgagttattcactgaatatacaccgtctgagtagtaggaacgtgcatctctatgcagccgacttcctgaaggagtaggtcaatgtaacgtcatttctcttccgaaaaaacctaccagcagaaccccattcactattcgccagattgttgtaccatccgtcgtatctttgaaattcctcattttgttggattc | |||
| Mapping_target | F56C11 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (15) | |||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00000253 | |||
| Transcript | F56C11.1.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F56C11.1.1:c.298+15C>T | ||||
| Intron_number | 4/20 | ||||
| F56C11.1.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F56C11.1.2:c.298+15C>T | ||||
| Intron_number | 4/20 | ||||
| Method | WGS_Pasadena_Quinlan |
