WormBase Tree Display for Variation: WBVar00002274
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WBVar00002274 | Evidence | Paper_evidence | WBPaper00030778 | |||
---|---|---|---|---|---|---|
WBPaper00055507 | ||||||
Name | Public_name | WBVar00002274 | ||||
Other_name | cbs2567 | |||||
cb2567 | Paper_evidence | WBPaper00055507 | ||||
Sequence_details | SMap | S_parent | Sequence | cb25.fpc3857a | ||
Flanking_sequences | tcacttattcatgatggaatggaca | tttccacatagctgcttgttccaaa | ||||
Mapping_target | cb25.fpc3857a | |||||
Type_of_mutation | Substitution | G | A | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Predicted_SNP | ||||||
RFLP | Reference_strain_digest | CTNAG | BstDEI, DdeI | 317 312 263 108 | ||
CAC | HindI | 118 98 94 87 77 76 63 57 57 44 30 27 26 23 22 20 15 13 9 8 7 7 6 4 4 3 3 2 | ||||
Polymorphic_strain_digest | CTNAG | BstDEI, DdeI | 317 312 233 108 30 | |||
CAC | HindI | 118 98 94 87 77 76 63 57 57 44 30 29 27 26 23 20 15 13 9 8 7 6 4 4 3 3 2 | ||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis briggsae | ||||
Strain | WBStrain00041077 | |||||
Laboratory | CP | |||||
Person | WBPerson3706 | |||||
WBPerson227 | ||||||
WBPerson225 | ||||||
Status | Live | |||||
Reference | WBPaper00030778 | |||||
WBPaper00055507 | ||||||
Remark | Predicted by: CrossMatch, Polybayes, ssaha-SNP v1.0, ssaha-SNP v2.0 | |||||
This SNP was observed in 1 sequencing read(s) | ||||||
Method | SNP |