WormBase Tree Display for Variation: WBVar00002074

WBVar00002074 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00002074
    Other_name: cbs2525
      cb2525 Paper_evidence: WBPaper00055507
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc3857a
    Flanking_sequences: ctgtaccatgcaaccttgagacacg ccaaagtcttctctacttctctgtg
    Mapping_target: cb25.fpc3857a
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: GWGCWC Alw21I, AspHI, Bbv12I, BsiHKAI, HgiAI 815 185
        GDGCHC BmyI, Bsp1286I, MhlI, SduI 815 185
        GACNNNNGTC BoxI, BstPAI, PshAI 1000
        GGCC BshFI, BshI, BsuRI, HaeIII, PalI 500 469 31
        YGGCCR CfrI, EaeI 502 469 29
        RGCY CviJI, CviTI 500 177 139 104 31 26 23
      Polymorphic_strain_digest: GWGCWC Alw21I, AspHI, Bbv12I, BsiHKAI, HgiAI 1000
        GDGCHC BmyI, Bsp1286I, MhlI, SduI 1000
        GACNNNNGTC BoxI, BstPAI, PshAI 503 497
        GGCC BshFI, BshI, BsuRI, HaeIII, PalI 969 31
        YGGCCR CfrI, EaeI 971 29
        RGCY CviJI, CviTI 526 177 139 104 31 23
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: CrossMatch, Polybayes, ssaha-SNP v1.0, ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP