WormBase Tree Display for Variation: WBVar00001941
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| WBVar00001941 | Name | Public_name | WBVar00001941 | ||
|---|---|---|---|---|---|
| Other_name | pas11985 | ||||
| cewivar00102296 | |||||
| Y53F4B.39b.1:c.*65A>T | |||||
| Y53F4B.39a.1:c.*65A>T | |||||
| HGVSg | CHROMOSOME_II:g.15115929A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y53F4B | |
| Flanking_sequences | gcgagattatcaaagtgctcaaagagcacgaggagatcaccagtatggatgtgactaatcaggtttatgctgactcgccgtgggctgtacgactggctgcgttgaacaatgtgaagctcgtgctgaagaagctttgcaaggatggagtcgttgagaatccgcattttgagactttcaagtggattggaggcagtagtagtggagaggagaagaagaatgaatcgtcgaatttgtagaaaaaaaaaattattttttggaattttaaatatttaattcgctctttatgtgttttcaaaatgt | gaatttacgatgttaattcgaacttttcatagattaaatttaagttttaacctacctatatttgagaattccaaaaaatctcgaaaatattcattttttaaattcgaaaaccatattttttcgaattaaaaaattcaaacttctggaaaaaatttgaaatttttaattttttttgtttgatttttcaaaaaatttccggaaaattaatttcagtaccaattttttcaaaatttcgagtatttttcgaatatctcgaagcggatttcgaattttgaaaattaaggaaataattttttttat | |||
| Mapping_target | Y53F4B | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (23) | |||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01442743 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00013176 | |||
| Transcript | Y53F4B.39b.1 | VEP_consequence | 3_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y53F4B.39b.1:c.*65A>T | ||||
| cDNA_position | 1063 | ||||
| Exon_number | 6/6 | ||||
| Y53F4B.39a.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y53F4B.39a.1:c.*65A>T | ||||
| cDNA_position | 957 | ||||
| Exon_number | 5/5 | ||||
| Method | WGS_Pasadena_Quinlan |
