WormBase Tree Display for Variation: WBVar00000329
expand all nodes | collapse all nodes | view schema
WBVar00000329 | Evidence | Paper_evidence | WBPaper00028766 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | ay36 | |||||
Other_name | F31E3.1.1:c.236T>C | ||||||
CE01241:p.Leu79Ser | |||||||
HGVSg | CHROMOSOME_III:g.6980313T>C | ||||||
Sequence_details | SMap | S_parent | Sequence | F31E3 | |||
Flanking_sequences | atcctcaattaatgcgacttgataatatgt | agtggcggaaggcgttgcaggaccagataa | |||||
Mapping_target | F31E3 | ||||||
Type_of_mutation | Substitution | t | c | Paper_evidence | WBPaper00028766 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Laboratory | NH | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00000443 | |||||
Transcript | F31E3.1.1 | VEP_consequence | missense_variant | ||||
VEP_impact | MODERATE | ||||||
HGVSc | F31E3.1.1:c.236T>C | ||||||
HGVSp | CE01241:p.Leu79Ser | ||||||
cDNA_position | 239 | ||||||
CDS_position | 236 | ||||||
Protein_position | 79 | ||||||
Exon_number | 3/7 | ||||||
Codon_change | tTa/tCa | ||||||
Amino_acid_change | L/S | ||||||
Genetics | Interpolated_map_position | III | -0.85326 | ||||
Description | Phenotype | WBPhenotype:0000006 | Paper_evidence | WBPaper00028766 | |||
Curator_confirmed | WBPerson557 | ||||||
Variation_effect | Hypomorph_reduction_of_function | Paper_evidence | WBPaper00028766 | ||||
Curator_confirmed | WBPerson557 | ||||||
WBPhenotype:0000245 | Paper_evidence | WBPaper00028766 | |||||
Curator_confirmed | WBPerson557 | ||||||
Variation_effect | Hypomorph_reduction_of_function | Paper_evidence | WBPaper00028766 | ||||
Curator_confirmed | WBPerson557 | ||||||
WBPhenotype:0000643 | Paper_evidence | WBPaper00028766 | |||||
Curator_confirmed | WBPerson557 | ||||||
Remark | Weak Unc | Paper_evidence | WBPaper00028766 | ||||
Curator_confirmed | WBPerson557 | ||||||
Variation_effect | Hypomorph_reduction_of_function | Paper_evidence | WBPaper00028766 | ||||
Curator_confirmed | WBPerson557 | ||||||
Reference | WBPaper00028766 | ||||||
Method | Substitution_allele |