WormBase Tree Display for Variation: WBVar00000193
expand all nodes | collapse all nodes | view schema
| WBVar00000193 | Evidence | Paper_evidence | WBPaper00005256 | ||
|---|---|---|---|---|---|
| Name | Public_name | ar103 | |||
| Other_name | CE27425:p.Gln140Ter | ||||
| F22B5.1.1:c.418C>T | |||||
| HGVSg | CHROMOSOME_II:g.8444774C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | F22B5 | |
| Flanking_sequences | ccaggggccattgatgtgaattcaatagca | aggtaattcagatgtcttcagtatatactt | |||
| Mapping_target | F22B5 | ||||
| Type_of_mutation | Substitution | c | t | ||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00007993 | ||||
| Laboratory | GS | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00001358 | |||
| Transcript | F22B5.1.1 | VEP_consequence | stop_gained,splice_region_variant | ||
| VEP_impact | HIGH | ||||
| HGVSc | F22B5.1.1:c.418C>T | ||||
| HGVSp | CE27425:p.Gln140Ter | ||||
| cDNA_position | 418 | ||||
| CDS_position | 418 | ||||
| Protein_position | 140 | ||||
| Exon_number | 2/4 | ||||
| Codon_change | Cag/Tag | ||||
| Amino_acid_change | Q/* | ||||
| Genetics | Interpolated_map_position | II | 0.778236 | ||
| Description (2) | |||||
| Reference | WBPaper00032446 | ||||
| Method | Substitution_allele |
