WormBase Tree Display for Variation: WBVar02132290
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WBVar02132290 | Evidence | Paper_evidence | WBPaper00045317 | |||
---|---|---|---|---|---|---|
Name | Public_name | h13737 | ||||
Other_name (18) | ||||||
HGVSg | CHROMOSOME_III:g.7628803G>A | |||||
Sequence_details | SMap | S_parent | Sequence | ZK783 | ||
Flanking_sequences | TGGAAGATTAGCCTGTACTTCTTATTGTCCACCAAACTCT | AATGTGTAGGAGGGTACTGTGAATGTGTCAGTGGATACGG | ||||
Mapping_target | CHROMOSOME_III | |||||
Source_location | 200 | CHROMOSOME_III | 7628731 | 7628731 | ||
Type_of_mutation | Substitution | G | A | |||
SeqStatus | Sequenced | |||||
Variation_type | Allele | |||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023809 | |||||
Laboratory | KR | |||||
Analysis | WGS_Rose | |||||
Status | Live | |||||
Affects | Gene | WBGene00022816 | ||||
Transcript | ZK783.1f.1 (12) | |||||
ZK783.1j.1 (12) | ||||||
ZK783.1g.1 (12) | ||||||
ZK783.1h.1 (12) | ||||||
ZK783.1d.1 (12) | ||||||
ZK783.1e.1 (12) | ||||||
ZK783.1k.1 | VEP_consequence | missense_variant | ||||
VEP_impact | MODERATE | |||||
SIFT | 0.27 | tolerated | ||||
PolyPhen | 0 | unknown | ||||
HGVSc | ZK783.1k.1:c.1579G>A | |||||
HGVSp | CE47705:p.Glu527Lys | |||||
cDNA_position | 1579 | |||||
CDS_position | 1579 | |||||
Protein_position | 527 | |||||
Exon_number | 7/25 | |||||
Codon_change | Gaa/Aaa | |||||
Amino_acid_change | E/K | |||||
ZK783.1a.1 (12) | ||||||
ZK783.1b.1 (12) | ||||||
Reference | WBPaper00040589 | |||||
WBPaper00000975 | ||||||
WBPaper00003985 | ||||||
WBPaper00000699 | ||||||
WBPaper00045317 | ||||||
Method | WGS_Rose |