WormBase Tree Display for Variation: WBVar00186689
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WBVar00186689 | Evidence | Paper_evidence | WBPaper00038208 | |||
---|---|---|---|---|---|---|
Name (3) | ||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||
Flanking_sequences | ccaccaactccaaaagaagaaattc | aaatattaaagtacctcttaatcca | ||||
Mapping_target | Y54G2A | |||||
Type_of_mutation | Substitution | G | A | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Predicted_SNP | ||||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (11) | ||||||
Laboratory | RW | |||||
Person | WBPerson1562 | |||||
WBPerson4037 | ||||||
Analysis | WGS_Hawaiian_Waterston | |||||
WGS_Yanai | ||||||
Million_mutation_project_reanalysis | ||||||
History | Acquires_merge | WBVar00570754 | ||||
Status | Live | |||||
Affects | Gene | WBGene00003008 | ||||
Transcript | Y54G2A.1.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | |||||
SIFT | 0.05 | deleterious | ||||
PolyPhen | 0.003 | benign | ||||
HGVSc | Y54G2A.1.1:c.311G>A | |||||
HGVSp | CE26703:p.Arg104Gln | |||||
cDNA_position | 313 | |||||
CDS_position | 311 | |||||
Protein_position | 104 | |||||
Exon_number | 4/5 | |||||
Codon_change | cGa/cAa | |||||
Amino_acid_change | R/Q | |||||
Reference | WBPaper00038208 | |||||
Remark | [20081124 db] this Variation was previously named hw53965 | |||||
Method | WGS_Hawaiian_Waterston |