WormBase Tree Display for Variation: WBVar00000170
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| WBVar00000170 | Evidence | Paper_evidence | WBPaper00003577 | ||||
|---|---|---|---|---|---|---|---|
| Name (3) | |||||||
| Sequence_details | SMap | S_parent | Sequence | W02D7 | |||
| Flanking_sequences | tcaggaaccaaaatgggtctgatgttcgaa | ttgctgaaggaggattcctcgatattgatg | |||||
| Mapping_target | W02D7 | ||||||
| Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00003577 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Laboratory | GS | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00004766 | |||||
| Transcript | W02D7.7.1 | VEP_consequence | missense_variant | ||||
| VEP_impact | MODERATE | ||||||
| SIFT | 0.25 | tolerated | |||||
| PolyPhen | 1 | probably_damaging | |||||
| HGVSc | W02D7.7.1:c.139G>A | ||||||
| HGVSp | CE14448:p.Val47Ile | ||||||
| cDNA_position | 154 | ||||||
| CDS_position | 139 | ||||||
| Protein_position | 47 | ||||||
| Exon_number | 2/6 | ||||||
| Codon_change | Gtt/Att | ||||||
| Amino_acid_change | V/I | ||||||
| Genetics | Interpolated_map_position | V | 1.27329 | ||||
| Reference | WBPaper00003577 | ||||||
| Method | Substitution_allele |
