WormBase Tree Display for Variation: WBVar00266636
expand all nodes | collapse all nodes | view schema
WBVar00266636 | Evidence | Paper_evidence | WBPaper00030754 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | u280 | |||||
Other_name (34) | |||||||
HGVSg | CHROMOSOME_IV:g.12782539C>T | ||||||
Sequence_details | SMap | S_parent | Sequence | ZK897 | |||
Flanking_sequences | gatgacgaaaatgagcgacatctatgggtc | aggctctgtaccgagccacaggtcaagcct | |||||
Mapping_target | ZK897 | ||||||
Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00030754 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Laboratory | TU | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00006767 | |||||
Transcript | ZK897.1c.1 | VEP_consequence | stop_gained | ||||
VEP_impact | HIGH | ||||||
HGVSc | ZK897.1c.1:c.2002C>T | ||||||
HGVSp | CE44563:p.Gln668Ter | ||||||
cDNA_position | 2002 | ||||||
CDS_position | 2002 | ||||||
Protein_position | 668 | ||||||
Exon_number | 11/21 | ||||||
Codon_change | Cag/Tag | ||||||
Amino_acid_change | Q/* | ||||||
ZK897.1p.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | ZK897.1p.1:c.2023C>T | ||||||
HGVSp | CE49853:p.Gln675Ter | ||||||
cDNA_position | 2023 | ||||||
CDS_position | 2023 | ||||||
Protein_position | 675 | ||||||
Exon_number | 12/22 | ||||||
Codon_change | Cag/Tag | ||||||
Amino_acid_change | Q/* | ||||||
ZK897.1q.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | ZK897.1q.1:c.2002C>T | ||||||
HGVSp | CE49778:p.Gln668Ter | ||||||
cDNA_position | 2002 | ||||||
CDS_position | 2002 | ||||||
Protein_position | 668 | ||||||
Exon_number | 11/21 | ||||||
Codon_change | Cag/Tag | ||||||
Amino_acid_change | Q/* | ||||||
ZK897.1o.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | ZK897.1o.1:c.2002C>T | ||||||
HGVSp | CE49924:p.Gln668Ter | ||||||
cDNA_position | 2002 | ||||||
CDS_position | 2002 | ||||||
Protein_position | 668 | ||||||
Exon_number | 11/20 | ||||||
Codon_change | Cag/Tag | ||||||
Amino_acid_change | Q/* | ||||||
ZK897.1s.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | ZK897.1s.1:c.658C>T | ||||||
HGVSp | CE49876:p.Gln220Ter | ||||||
cDNA_position | 658 | ||||||
CDS_position | 658 | ||||||
Protein_position | 220 | ||||||
Exon_number | 4/14 | ||||||
Codon_change | Cag/Tag | ||||||
Amino_acid_change | Q/* | ||||||
ZK897.1a.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | ZK897.1a.1:c.2038C>T | ||||||
HGVSp | CE44675:p.Gln680Ter | ||||||
cDNA_position | 2057 | ||||||
CDS_position | 2038 | ||||||
Protein_position | 680 | ||||||
Exon_number | 13/22 | ||||||
Codon_change | Cag/Tag | ||||||
Amino_acid_change | Q/* | ||||||
ZK897.1l.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | ZK897.1l.1:c.2038C>T | ||||||
HGVSp | CE49750:p.Gln680Ter | ||||||
cDNA_position | 2038 | ||||||
CDS_position | 2038 | ||||||
Protein_position | 680 | ||||||
Exon_number | 12/22 | ||||||
Codon_change | Cag/Tag | ||||||
Amino_acid_change | Q/* | ||||||
ZK897.1k.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | ZK897.1k.1:c.2059C>T | ||||||
HGVSp | CE49815:p.Gln687Ter | ||||||
cDNA_position | 2059 | ||||||
CDS_position | 2059 | ||||||
Protein_position | 687 | ||||||
Exon_number | 13/22 | ||||||
Codon_change | Cag/Tag | ||||||
Amino_acid_change | Q/* | ||||||
ZK897.1d.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | ZK897.1d.1:c.658C>T | ||||||
HGVSp | CE44694:p.Gln220Ter | ||||||
cDNA_position | 658 | ||||||
CDS_position | 658 | ||||||
Protein_position | 220 | ||||||
Exon_number | 4/12 | ||||||
Codon_change | Cag/Tag | ||||||
Amino_acid_change | Q/* | ||||||
ZK897.1e.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | ZK897.1e.1:c.658C>T | ||||||
HGVSp | CE44651:p.Gln220Ter | ||||||
cDNA_position | 658 | ||||||
CDS_position | 658 | ||||||
Protein_position | 220 | ||||||
Exon_number | 4/13 | ||||||
Codon_change | Cag/Tag | ||||||
Amino_acid_change | Q/* | ||||||
ZK897.1i.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | ZK897.1i.1:c.2023C>T | ||||||
HGVSp | CE47452:p.Gln675Ter | ||||||
cDNA_position | 2023 | ||||||
CDS_position | 2023 | ||||||
Protein_position | 675 | ||||||
Exon_number | 12/21 | ||||||
Codon_change | Cag/Tag | ||||||
Amino_acid_change | Q/* | ||||||
ZK897.1n.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | ZK897.1n.1:c.2002C>T | ||||||
HGVSp | CE49928:p.Gln668Ter | ||||||
cDNA_position | 2002 | ||||||
CDS_position | 2002 | ||||||
Protein_position | 668 | ||||||
Exon_number | 11/21 | ||||||
Codon_change | Cag/Tag | ||||||
Amino_acid_change | Q/* | ||||||
ZK897.1h.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | ZK897.1h.1:c.1966C>T | ||||||
HGVSp | CE47155:p.Gln656Ter | ||||||
cDNA_position | 1966 | ||||||
CDS_position | 1966 | ||||||
Protein_position | 656 | ||||||
Exon_number | 10/19 | ||||||
Codon_change | Cag/Tag | ||||||
Amino_acid_change | Q/* | ||||||
ZK897.1b.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | ZK897.1b.1:c.2002C>T | ||||||
HGVSp | CE44637:p.Gln668Ter | ||||||
cDNA_position | 2021 | ||||||
CDS_position | 2002 | ||||||
Protein_position | 668 | ||||||
Exon_number | 12/20 | ||||||
Codon_change | Cag/Tag | ||||||
Amino_acid_change | Q/* | ||||||
ZK897.1j.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | ZK897.1j.1:c.2059C>T | ||||||
HGVSp | CE49911:p.Gln687Ter | ||||||
cDNA_position | 2059 | ||||||
CDS_position | 2059 | ||||||
Protein_position | 687 | ||||||
Exon_number | 13/23 | ||||||
Codon_change | Cag/Tag | ||||||
Amino_acid_change | Q/* | ||||||
ZK897.1m.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | ZK897.1m.1:c.2038C>T | ||||||
HGVSp | CE49941:p.Gln680Ter | ||||||
cDNA_position | 2038 | ||||||
CDS_position | 2038 | ||||||
Protein_position | 680 | ||||||
Exon_number | 12/21 | ||||||
Codon_change | Cag/Tag | ||||||
Amino_acid_change | Q/* | ||||||
ZK897.1r.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | ZK897.1r.1:c.1966C>T | ||||||
HGVSp | CE49966:p.Gln656Ter | ||||||
cDNA_position | 1966 | ||||||
CDS_position | 1966 | ||||||
Protein_position | 656 | ||||||
Exon_number | 10/20 | ||||||
Codon_change | Cag/Tag | ||||||
Amino_acid_change | Q/* | ||||||
Genetics | Interpolated_map_position | IV | 6.32069 | ||||
Description (2) | |||||||
Reference | WBPaper00015225 | ||||||
WBPaper00017299 | |||||||
WBPaper00030754 | |||||||
WBPaper00048388 | |||||||
Method | Substitution_allele |