WormBase Tree Display for Variation: WBVar00200486

WBVar00200486 Evidence: Paper_evidence: WBPaper00038208
  Name: Public_name: WBVar00200486
    Other_name (28)
    HGVSg: CHROMOSOME_V:g.23692A>C
  Sequence_details: SMap: S_parent: Sequence: B0348
    Flanking_sequences: ggttttttttcagaattttttattt tcgtgaatgatcttttttgcatgta
    Mapping_target: B0348
    Type_of_mutation: Substitution: A C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (12)
    Laboratory: RW
    Person: WBPerson1562
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00579338
    Status: Live
  Affects: Gene: WBGene00001177
    Transcript: B0348.4r.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0348.4r.1:c.583-101A>C
        Intron_number: 3/19
      B0348.4o.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0348.4o.1:c.583-101A>C
        Intron_number: 4/21
      B0348.4v.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0348.4v.1:c.583-101A>C
        Intron_number: 4/20
      B0348.4x.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0348.4x.1:c.583-101A>C
        Intron_number: 3/17
      B0348.4j.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0348.4j.1:c.666+47A>C
        Intron_number: 5/21
      B0348.4t.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0348.4t.1:c.583-101A>C
        Intron_number: 3/18
      B0348.4d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0348.4d.1:c.666+47A>C
        Intron_number: 4/22
      B0348.4e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0348.4e.1:c.666+47A>C
        Intron_number: 4/21
      B0348.4n.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0348.4n.1:c.583-101A>C
        Intron_number: 4/21
      B0348.4q.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0348.4q.1:c.583-101A>C
        Intron_number: 4/20
      B0348.4c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0348.4c.1:c.666+47A>C
        Intron_number: 5/11
      B0348.4l.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0348.4l.1:c.666+47A>C
        Intron_number: 5/20
      B0348.4f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0348.4f.1:c.666+47A>C
        Intron_number: 5/22
      B0348.4k.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0348.4k.1:c.666+47A>C
        Intron_number: 5/20
      B0348.4b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0348.4b.1:c.666+47A>C
        Intron_number: 5/22
      B0348.4m.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0348.4m.1:c.666+47A>C
        Intron_number: 5/19
      B0348.4w.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0348.4w.1:c.583-101A>C
        Intron_number: 3/17
      B0348.4p.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0348.4p.1:c.583-101A>C
        Intron_number: 3/19
      B0348.4y.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0348.4y.1:c.583-101A>C
        Intron_number: 3/16
      B0348.4s.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0348.4s.1:c.583-101A>C
        Intron_number: 4/20
      B0348.4g.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0348.4g.1:c.666+47A>C
        Intron_number: 5/21
      B0348.4u.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0348.4u.1:c.583-101A>C
        Intron_number: 4/19
      B0348.4i.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0348.4i.1:c.666+47A>C
        Intron_number: 5/20
      B0348.4h.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0348.4h.1:c.666+47A>C
        Intron_number: 5/21
      B0348.4a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0348.4a.1:c.666+47A>C
        Intron_number: 5/21
  Reference: WBPaper00038208
  Remark: [20081124 db] this Variation was previously named hw67762
  Method: WGS_Hawaiian_Waterston