WormBase Tree Display for Variation: WBVar00143414

WBVar00143414 Evidence: Paper_evidence: WBPaper00005913
    Accession_evidence: AJ505904
  Name: Public_name: e698
    Other_name (17)
    HGVSg: CHROMOSOME_I:g.11770152G>A
  Sequence_details: SMap: S_parent: Sequence: ZK1151
    Flanking_sequences: tctcgagagcattggcgagagaagttggtg aagcttcatgatcttctccttgatgagctt
    Mapping_target: ZK1151
    Type_of_mutation: Substitution: g a
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004199
    Laboratory: CB
    Status: Live
  Affects: Gene: WBGene00006876
    Transcript: ZK1151.1e.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: ZK1151.1e.1:c.4621C>T
        HGVSp: CE53853:p.Pro1541Ser
        cDNA_position: 4680
        CDS_position: 4621
        Protein_position: 1541
        Exon_number: 17/17
        Codon_change: Cca/Tca
        Amino_acid_change: P/S
      ZK1151.1b.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: ZK1151.1b.1:c.5401C>T
        HGVSp: CE53925:p.Pro1801Ser
        cDNA_position: 5416
        CDS_position: 5401
        Protein_position: 1801
        Exon_number: 20/20
        Codon_change: Cca/Tca
        Amino_acid_change: P/S
      ZK1151.1f.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: ZK1151.1f.1:c.4618C>T
        HGVSp: CE53940:p.Pro1540Ser
        cDNA_position: 4618
        CDS_position: 4618
        Protein_position: 1540
        Exon_number: 16/16
        Codon_change: Cca/Tca
        Amino_acid_change: P/S
      ZK1151.1h.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: ZK1151.1h.1:c.4960C>T
        HGVSp: CE39998:p.Pro1654Ser
        cDNA_position: 4960
        CDS_position: 4960
        Protein_position: 1654
        Exon_number: 17/17
        Codon_change: Cca/Tca
        Amino_acid_change: P/S
      ZK1151.1m.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: ZK1151.1m.1:c.4098+3266C>T
        Intron_number: 10/23
      ZK1151.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: ZK1151.1c.1:c.4056+3266C>T
        Intron_number: 16/31
      ZK1151.1a.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: ZK1151.1a.1:c.5770C>T
        HGVSp: CE53995:p.Pro1924Ser
        cDNA_position: 5770
        CDS_position: 5770
        Protein_position: 1924
        Exon_number: 22/22
        Codon_change: Cca/Tca
        Amino_acid_change: P/S
      ZK1151.1k.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: ZK1151.1k.1:c.3717+3266C>T
        Intron_number: 14/27
      ZK1151.1j.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: ZK1151.1j.1:c.4056+3266C>T
        Intron_number: 15/29
      ZK1151.1l.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: ZK1151.1l.1:c.4437+3266C>T
        Intron_number: 11/24
      ZK1151.1d.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: ZK1151.1d.1:c.4867C>T
        HGVSp: CE53806:p.Pro1623Ser
        cDNA_position: 4867
        CDS_position: 4867
        Protein_position: 1623
        Exon_number: 17/17
        Codon_change: Cca/Tca
        Amino_acid_change: P/S
    Interactor (16)
  Genetics: Interpolated_map_position: I 9.61491
    Mapping_data: In_2_point: 646
        647
      In_multi_point: 566
        567
  Description (2)
  Reference: WBPaper00038193
    WBPaper00040080
    WBPaper00001328
    WBPaper00031865
    WBPaper00011329
    WBPaper00046146
  Method: Substitution_allele