WormBase Tree Display for Variation: WBVar00206006
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WBVar00206006 | Name | Public_name | WBVar00206006 | |||
---|---|---|---|---|---|---|
Other_name | uCE5-932 | |||||
haw73282 | ||||||
haw163606 | ||||||
cewivar00227714 | ||||||
CE14297:p.Tyr221Cys | ||||||
T28A11.9.1:c.662A>G | ||||||
HGVSg | CHROMOSOME_V:g.3248681A>G | |||||
Sequence_details | SMap | S_parent | Sequence | T28A11 | ||
Flanking_sequences | atgacaatttattttgtgttgggct | caaggtaattttaatttaaacaaaa | ||||
Mapping_target | T28A11 | |||||
Type_of_mutation | Substitution | A | G | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Predicted_SNP | ||||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00004602 | From_analysis | SNP_Swan | |||
WGS_Hawaiian_Waterston | ||||||
WGS_Yanai | ||||||
Million_mutation_project_reanalysis | ||||||
Laboratory | RW | |||||
Person | WBPerson1562 | |||||
WBPerson4037 | ||||||
Analysis | WGS_Hawaiian_Waterston | |||||
WGS_Yanai | ||||||
Million_mutation_project_reanalysis | ||||||
SNP_Swan | ||||||
History | Acquires_merge | WBVar00583471 | ||||
WBVar00271642 | ||||||
Status | Live | |||||
Affects | Gene | WBGene00005596 | ||||
Transcript | T28A11.9.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | |||||
SIFT | 0.04 | deleterious | ||||
PolyPhen | 0.997 | probably_damaging | ||||
HGVSc | T28A11.9.1:c.662A>G | |||||
HGVSp | CE14297:p.Tyr221Cys | |||||
cDNA_position | 662 | |||||
CDS_position | 662 | |||||
Protein_position | 221 | |||||
Exon_number | 5/7 | |||||
Codon_change | tAc/tGc | |||||
Amino_acid_change | Y/C | |||||
Reference | WBPaper00038208 | |||||
WBPaper00005369 | ||||||
Remark | [20081124 db] this Variation was previously named hw73282 | |||||
Method | WGS_Hawaiian_Waterston |