WormBase Tree Display for Variation: WBVar00145031
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| WBVar00145031 | Evidence | Paper_evidence | WBPaper00031667 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | e2882 | |||||
| Other_name | T23F2.1a.1:c.362C>T | ||||||
| CE28488:p.Pro121Leu | |||||||
| T23F2.1b.1:c.404C>T | |||||||
| CE54583:p.Pro135Leu | |||||||
| HGVSg | CHROMOSOME_X:g.5494226C>T | ||||||
| Sequence_details | SMap | S_parent | Sequence | T23F2 | |||
| Flanking_sequences | actgccattttccacaacagttagtaacac | gtctcgatttttcctgtatagatggtatgc | |||||
| Mapping_target | T23F2 | ||||||
| Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00031667 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00004682 | ||||||
| Laboratory | CB | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00044623 | |||||
| Transcript | T23F2.1b.1 | VEP_consequence | missense_variant | ||||
| VEP_impact | MODERATE | ||||||
| HGVSc | T23F2.1b.1:c.404C>T | ||||||
| HGVSp | CE54583:p.Pro135Leu | ||||||
| cDNA_position | 404 | ||||||
| CDS_position | 404 | ||||||
| Protein_position | 135 | ||||||
| Exon_number | 4/9 | ||||||
| Codon_change | cCg/cTg | ||||||
| Amino_acid_change | P/L | ||||||
| T23F2.1a.1 | VEP_consequence | missense_variant | |||||
| VEP_impact | MODERATE | ||||||
| SIFT | 0.05 | tolerated | |||||
| PolyPhen | 1 | probably_damaging | |||||
| HGVSc | T23F2.1a.1:c.362C>T | ||||||
| HGVSp | CE28488:p.Pro121Leu | ||||||
| cDNA_position | 362 | ||||||
| CDS_position | 362 | ||||||
| Protein_position | 121 | ||||||
| Exon_number | 3/9 | ||||||
| Codon_change | cCg/cTg | ||||||
| Amino_acid_change | P/L | ||||||
| Genetics | Interpolated_map_position | X | -5.24244 | ||||
| Description (2) | |||||||
| Reference | WBPaper00031667 | ||||||
| Method | Substitution_allele |
