WormBase Tree Display for Variation: WBVar00584086

WBVar00584086 Name: Public_name: WBVar00584086
    Other_name: haw164221
      cewivar00229455
      W08A12.1a.1:c.47+1808A>G
      W08A12.1b.3:c.141+1808A>G
      W08A12.1e.1:c.66+1808A>G
      W08A12.1c.1:c.123+1808A>G
      W08A12.1b.2:c.141+1808A>G
      W08A12.1b.1:c.141+1808A>G
    HGVSg: CHROMOSOME_V:g.3693866A>G
  Sequence_details: SMap: S_parent: Sequence: W08A12
    Flanking_sequences: CACTCCGCTCGGAAACTATCGAATTCCGACACGATATCTGCGAAAATGAT ATAGTGACAATGATCGAACGGTTTTTTTCTACGCCTAGTGCCCACCTACC
    Mapping_target: W08A12
    Type_of_mutation: Substitution: a g
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_Yanai
          Million_mutation_project_reanalysis
          WGS_Andersen
      WBStrain00005832 From_analysis: WGS_Andersen
      WBStrain00005835 From_analysis: WGS_Andersen
      WBStrain00006622 From_analysis: Million_mutation_project_reanalysis
          WGS_Andersen
      WBStrain00006623 From_analysis: WGS_Andersen
      WBStrain00006624 From_analysis: WGS_Andersen
      WBStrain00006635 From_analysis: WGS_Andersen
      WBStrain00006637 From_analysis: Million_mutation_project_reanalysis
          WGS_Andersen
      WBStrain00006649 From_analysis: WGS_Andersen
      WBStrain00006690 From_analysis: WGS_Andersen
      WBStrain00006691 From_analysis: WGS_Andersen
      WBStrain00006697 From_analysis: WGS_Andersen
      WBStrain00006698 From_analysis: WGS_Andersen
      WBStrain00022850 From_analysis: Million_mutation_project_reanalysis
          WGS_Andersen
      WBStrain00022928 From_analysis: WGS_Andersen
      WBStrain00022930 From_analysis: Million_mutation_project_reanalysis
          WGS_Andersen
      WBStrain00023072 From_analysis: Million_mutation_project_reanalysis
          WGS_Andersen
      WBStrain00023084 From_analysis: WGS_Andersen
      WBStrain00023144 From_analysis: WGS_Andersen
      WBStrain00023149 From_analysis: WGS_Andersen
      WBStrain00023150 From_analysis: WGS_Andersen
      WBStrain00023151 From_analysis: WGS_Andersen
      WBStrain00023180 From_analysis: WGS_Andersen
      WBStrain00023211 From_analysis: WGS_Andersen
      WBStrain00023279 From_analysis: WGS_Andersen
      WBStrain00027653 From_analysis: WGS_Andersen
      WBStrain00027656 From_analysis: WGS_Andersen
      WBStrain00031279 From_analysis: WGS_Andersen
      WBStrain00031284 From_analysis: WGS_Andersen
    Laboratory: QX
    Person: WBPerson4037
      WBPerson1730
    Analysis: WGS_Yanai
      Million_mutation_project_reanalysis
      WGS_Andersen
    History: Acquires_merge: WBVar01458973
    Status: Live
  Affects: Gene: WBGene00021078
    Transcript: W08A12.1b.3 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: W08A12.1b.3:c.141+1808A>G
        Intron_number: 3/7
      W08A12.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: W08A12.1a.1:c.47+1808A>G
        Intron_number: 2/7
      W08A12.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: W08A12.1c.1:c.123+1808A>G
        Intron_number: 3/7
      W08A12.1b.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: W08A12.1b.2:c.141+1808A>G
        Intron_number: 4/8
      W08A12.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: W08A12.1b.1:c.141+1808A>G
        Intron_number: 4/8
      W08A12.1e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: W08A12.1e.1:c.66+1808A>G
        Intron_number: 1/4
  Reference: WBPaper00038208
    WBPaper00040707
  Method: WGS_Yanai