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WormBase Tree Display for Variation: WBVar00102801

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Name Class

WBVar00102801EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar00102801
Other_namepas7660
cewivar00088378
CE25336:p.Gln172=
Y49F6B.2.1:c.516A>G
HGVSgCHROMOSOME_II:g.3503645A>G
Sequence_detailsSMapS_parentSequenceY49F6B
Flanking_sequencesagtttgaaggcgatcatcagcctcaaaataggcttttaggccggaatgcggccgccaggctgaagaaagtgcgttgaaatcgatgaaaattcgattaaaatcgctcaaaatccaataaaaatcgctatttttccagtcagaacgcgaaaaaaccaaaggatccgcttggttcaaccttccagcgacggagctcaccgatgagcacaaacgagatttggaattccttcaaatgagatcaactctcgatccattggctcattatcgtcgaaatgaccgggctgtactgccgaaatacttccagttcgagaaaatttaaaaaattcccaaaaaatccgagatttttcaggttggacgagtcgttgacgctccagaagacttttattcgagtagaatggtgcgaaaagagcgaaaaaagacgatggtcgacgagattttgcataatgaggaatcgttgagcaaagccaagaaaaagtacgggaaaatcaagaatttttgtgaaaaaattcaagtttttgcgtttttaacgttaaaatcgtgatttttagagcaaaaatgagctaaaaaggataaaaattggccgattttcacccaaaacggcga
Mapping_targetY49F6B
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000033From_analysisWGS_Andersen
WBStrain00000034From_analysisMillion_mutation_project_reanalysis
WBStrain00000035From_analysisWGS_Andersen
WBStrain00004445From_analysisWGS_Andersen
WBStrain00004598From_analysisWGS_Andersen
WBStrain00004599From_analysisMillion_mutation_project_reanalysis
WGS_Andersen
WBStrain00004601From_analysisWGS_Andersen
WBStrain00004603From_analysisWGS_Andersen
WBStrain00004604From_analysisWGS_Pasadena_Quinlan
WGS_Andersen
WBStrain00005297From_analysisWGS_Andersen
WBStrain00005299From_analysisWGS_Andersen
WBStrain00005300From_analysisWGS_Andersen
WBStrain00005301From_analysisWGS_Andersen
WBStrain00005304From_analysisWGS_Andersen
WBStrain00005307From_analysisWGS_Andersen
WBStrain00005308From_analysisWGS_Andersen
WBStrain00005310From_analysisWGS_Andersen
WBStrain00005311From_analysisWGS_Andersen
WBStrain00005313From_analysisWGS_Andersen
WBStrain00006369From_analysisWGS_Andersen
WBStrain00006635From_analysisWGS_Andersen
WBStrain00006637From_analysisMillion_mutation_project_reanalysis
WGS_Andersen
WBStrain00006695From_analysisWGS_Andersen
WBStrain00006696From_analysisWGS_Andersen
WBStrain00006703From_analysisWGS_Andersen
WBStrain00006704From_analysisWGS_Andersen
WBStrain00006705From_analysisWGS_Andersen
WBStrain00006706From_analysisWGS_Andersen
WBStrain00006707From_analysisWGS_Andersen
WBStrain00008273From_analysisMillion_mutation_project_reanalysis
WBStrain00022867From_analysisWGS_Andersen
WBStrain00022868From_analysisMillion_mutation_project_reanalysis
WBStrain00022869From_analysisWGS_Andersen
WBStrain00022870From_analysisWGS_Andersen
WBStrain00022872From_analysisWGS_Andersen
WBStrain00022873From_analysisWGS_Andersen
WBStrain00022874From_analysisWGS_Andersen
WBStrain00022877From_analysisWGS_Andersen
WBStrain00023071From_analysisWGS_Andersen
WBStrain00023111From_analysisWGS_Andersen
WBStrain00023112From_analysisWGS_Andersen
WBStrain00023140From_analysisWGS_Andersen
WBStrain00023190From_analysisWGS_Andersen
WBStrain00023228From_analysisWGS_Andersen
WBStrain00023266From_analysisWGS_Andersen
WBStrain00023665From_analysisMillion_mutation_project_reanalysis
WGS_Andersen
WBStrain00030545From_analysisWGS_Andersen
WBStrain00030546From_analysisWGS_Andersen
WBStrain00030851From_analysisWGS_Andersen
WBStrain00031113From_analysisMillion_mutation_project_reanalysis
WGS_Andersen
WBStrain00031279From_analysisWGS_Andersen
WBStrain00031284From_analysisWGS_Andersen
WBStrain00031286From_analysisWGS_Andersen
WBStrain00031301From_analysisWGS_Andersen
WBStrain00033309From_analysisWGS_Andersen
LaboratoryQX
PersonWBPerson6900
WBPerson1730
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
WGS_Andersen
HistoryAcquires_mergeWBVar01437038
StatusLive
AffectsGeneWBGene00021715
TranscriptY49F6B.2.1VEP_consequencesplice_region_variant,synonymous_variant
VEP_impactLOW
HGVScY49F6B.2.1:c.516A>G
HGVSpCE25336:p.Gln172=
cDNA_position522
CDS_position516
Protein_position172
Exon_number4/7
Codon_changecaA/caG
Amino_acid_changeQ
ReferenceWBPaper00040707
MethodWGS_Pasadena_Quinlan