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WormBase Tree Display for Variation: WBVar00033846

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Name Class

WBVar00033846EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar00033846
Other_namepas18366
cewivar00104644
Y55D5A.5c.1:c.*272G>A
Y55D5A.5a.1:c.*272G>A
HGVSgCHROMOSOME_III:g.2995647C>T
Sequence_detailsSMapS_parentSequenceY55D5A
Flanking_sequencesatatttaatcgattttaagaaattttggaaaaaaatcgtcaaaaatcgataaaatattgattattttgtcgaaaatcaattttttcatcgaattatcgattttcagaaaaaaaaatccaaattttaccggaatttcgataaatcaaaatttttttcaaaaatcgaaaaattatcgatttttgcaaaaagaaaatcgatacattatcgttttttaccgggaaattcaaaaattatcgattttaagctcaaaaaatcgacaaaaattcaatttttcacatgaaattttcgtcagcgaacgtaaaactcagaaaaaaatcttgtttgaaagacactatctatggaattcacgggaagtttttgatggttttttgttgcaagggggctcttgtcttaggactcgtcacaatgtatatggggggtaataacaaaaaaaaatacagagatttgaaaaatggggtaaaattattcagaatttttcagaaaaaatctgaaaaaaaatccgatattcgtgtagagatatgataatgtgggagataatttataatttaagaggcgggattttttgggggtttcagacaagtggatgatgctcattatcct
Mapping_targetY55D5A
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000033From_analysisWGS_Andersen
WBStrain00000034From_analysisMillion_mutation_project_reanalysis
WBStrain00000035From_analysisWGS_Andersen
WBStrain00004445From_analysisWGS_Andersen
WBStrain00004599From_analysisWGS_Andersen
WBStrain00004601From_analysisWGS_Andersen
WBStrain00004603From_analysisWGS_Andersen
WBStrain00004604From_analysisWGS_Pasadena_Quinlan
WGS_Andersen
WBStrain00005297From_analysisWGS_Andersen
WBStrain00005298From_analysisWGS_Andersen
WBStrain00005299From_analysisWGS_Andersen
WBStrain00005300From_analysisWGS_Andersen
WBStrain00005301From_analysisWGS_Andersen
WBStrain00005302From_analysisWGS_Andersen
WBStrain00005303From_analysisWGS_Andersen
WBStrain00005304From_analysisWGS_Andersen
WBStrain00005305From_analysisWGS_Andersen
WBStrain00005306From_analysisWGS_Andersen
WBStrain00005307From_analysisWGS_Andersen
WBStrain00005308From_analysisWGS_Andersen
WBStrain00005310From_analysisWGS_Andersen
WBStrain00005311From_analysisWGS_Andersen
WBStrain00005312From_analysisWGS_Andersen
WBStrain00005313From_analysisWGS_Andersen
WBStrain00005314From_analysisWGS_Andersen
WBStrain00005315From_analysisWGS_Andersen
WBStrain00005834From_analysisWGS_Andersen
WBStrain00005835From_analysisWGS_Andersen
WBStrain00006369From_analysisWGS_Andersen
WBStrain00006618From_analysisWGS_Andersen
WBStrain00006629From_analysisWGS_Andersen
WBStrain00006631From_analysisMillion_mutation_project_reanalysis
WGS_Andersen
WBStrain00006632From_analysisWGS_Andersen
WBStrain00006635From_analysisWGS_Andersen
WBStrain00006636From_analysisWGS_Andersen
WBStrain00006637From_analysisWGS_Andersen
WBStrain00006640From_analysisMillion_mutation_project_reanalysis
WGS_Andersen
WBStrain00006697From_analysisWGS_Andersen
WBStrain00008273From_analysisMillion_mutation_project_reanalysis
WBStrain00022878From_analysisMillion_mutation_project_reanalysis
WGS_Andersen
WBStrain00022879From_analysisWGS_Andersen
WBStrain00022880From_analysisWGS_Andersen
WBStrain00022885From_analysisWGS_Andersen
WBStrain00022887From_analysisMillion_mutation_project_reanalysis
WGS_Andersen
WBStrain00022893From_analysisWGS_Andersen
WBStrain00023018From_analysisMillion_mutation_project_reanalysis
WGS_Andersen
WBStrain00023049From_analysisWGS_Andersen
WBStrain00023050From_analysisWGS_Andersen
WBStrain00023071From_analysisWGS_Andersen
WBStrain00023072From_analysisMillion_mutation_project_reanalysis
WGS_Andersen
WBStrain00023075From_analysisWGS_Andersen
WBStrain00023084From_analysisWGS_Andersen
WBStrain00023139From_analysisWGS_Andersen
WBStrain00023191From_analysisMillion_mutation_project_reanalysis
WGS_Andersen
WBStrain00023212From_analysisWGS_Andersen
WBStrain00023219From_analysisWGS_Andersen
WBStrain00023665From_analysisMillion_mutation_project_reanalysis
WGS_Andersen
WBStrain00024204From_analysisMillion_mutation_project_reanalysis
WGS_Andersen
WBStrain00027647From_analysisMillion_mutation_project_reanalysis
WGS_Andersen
WBStrain00027648From_analysisMillion_mutation_project_reanalysis
WGS_Andersen
WBStrain00027653From_analysisWGS_Andersen
WBStrain00027656From_analysisWGS_Andersen
WBStrain00027660From_analysisMillion_mutation_project_reanalysis
WGS_Andersen
WBStrain00027661From_analysisWGS_Andersen
WBStrain00027662From_analysisMillion_mutation_project_reanalysis
WGS_Andersen
WBStrain00027669From_analysisWGS_Andersen
WBStrain00030545From_analysisWGS_Andersen
WBStrain00030546From_analysisWGS_Andersen
WBStrain00030851From_analysisWGS_Andersen
WBStrain00031286From_analysisWGS_Andersen
WBStrain00031301From_analysisWGS_Andersen
LaboratoryQX
PersonWBPerson6900
WBPerson1730
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
WGS_Andersen
HistoryAcquires_mergeWBVar01444714
StatusLive
AffectsGeneWBGene00000898
TranscriptY55D5A.5a.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScY55D5A.5a.1:c.*272G>A
cDNA_position5911
Exon_number19/19
Y55D5A.5c.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScY55D5A.5c.1:c.*272G>A
cDNA_position6222
Exon_number21/21
ReferenceWBPaper00040707
MethodWGS_Pasadena_Quinlan