WormBase Tree Display for Variation: WBVar00248869

WBVar00248869 Evidence: Paper_evidence: WBPaper00005927
      WBPaper00001835
      WBPaper00050256
  Name: Public_name: su1006
    Other_name: su006 Paper_evidence: WBPaper00005098
          WBPaper00005612
      CE03591:p.Arg71Cys
      T01B7.7.1:c.211C>T
    HGVSg: CHROMOSOME_II:g.8733311C>T
  Sequence_details: SMap: S_parent: Sequence: T01B7
    Flanking_sequences: ggagcaggaaccgcttccaaccgtgtgaga gtcaacaatatggaggatatggagccactg
    Mapping_target: T01B7
    Type_of_mutation: Substitution: c t Paper_evidence: WBPaper00001835
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain (270)
    Laboratory (13)
    Status: Live
  Affects: Gene: WBGene00004397
    Transcript: T01B7.7.1 (12)
    Interactor: WBInteraction000052037
      WBInteraction000052038
      WBInteraction000519642
      WBInteraction000537298
  Genetics: Interpolated_map_position: II 0.87118
  Description: Phenotype: WBPhenotype:0000502 Paper_evidence: WBPaper00005927
          WBPaper00000465
        Curator_confirmed: WBPerson48
          WBPerson712
        Remark: Severe dominant roller L3 through adult and Dauer; heterozygotes are indistinguishable from homozygotes. Paper_evidence: WBPaper00000465
            Curator_confirmed: WBPerson712
        Dominant: Paper_evidence: WBPaper00005927
            WBPaper00000465
          Curator_confirmed: WBPerson48
            WBPerson712
        EQ_annotations: Life_stage: WBls:0000035 PATO:0000460 Paper_evidence: WBPaper00005927
                  WBPaper00000465
                Curator_confirmed: WBPerson48
                  WBPerson712
            WBls:0000038 PATO:0000460 Paper_evidence: WBPaper00005927
                  WBPaper00000465
                Curator_confirmed: WBPerson48
                  WBPerson712
            WBls:0000041 PATO:0000460 Paper_evidence: WBPaper00005927
                  WBPaper00000465
                Curator_confirmed: WBPerson48
                  WBPerson712
            WBls:0000032 PATO:0000460 Paper_evidence: WBPaper00000465
                Curator_confirmed: WBPerson712
        Phenotype_assay: Temperature: 16C, 25C Paper_evidence: WBPaper00000465
              Curator_confirmed: WBPerson712
      WBPhenotype:0000643 Paper_evidence: WBPaper00051549
        Curator_confirmed: WBPerson15345
        Phenotype_assay: Genotype: zIs356 [Pdaf-16::daf-16a/b-gfp; rol-6] Paper_evidence: WBPaper00051549
              Curator_confirmed: WBPerson15345
            dvIs70 [hsp-16.2::gfp; rol-6(su1006)] Paper_evidence: WBPaper00051549
              Curator_confirmed: WBPerson15345
      WBPhenotype:0000645 Paper_evidence: WBPaper00000914
          WBPaper00005747
        Curator_confirmed: WBPerson48
          WBPerson2987
        Remark: Table 1 Paper_evidence: WBPaper00005747
            Curator_confirmed: WBPerson2987
        Semi_dominant: Paper_evidence: WBPaper00000914
          Curator_confirmed: WBPerson48
        Phenotype_assay: Genotype: kaIs12 [col-19::gfp] Paper_evidence: WBPaper00005747
              Curator_confirmed: WBPerson2987
      WBPhenotype:0001412 Paper_evidence: WBPaper00000465
        Curator_confirmed: WBPerson712
        Remark: Loops are present in the alae. Paper_evidence: WBPaper00000465
            Curator_confirmed: WBPerson712
        Recessive: Paper_evidence: WBPaper00000465
          Curator_confirmed: WBPerson712
        EQ_annotations: Life_stage: WBls:0000041 PATO:0000460 Paper_evidence: WBPaper00000465
                Curator_confirmed: WBPerson712
        Phenotype_assay: Temperature: 25C Paper_evidence: WBPaper00000465
              Curator_confirmed: WBPerson712
      WBPhenotype:0001516 Paper_evidence: WBPaper00000465
        Curator_confirmed: WBPerson712
        Remark: Alae make 2 whole turns along the length of the animal. Paper_evidence: WBPaper00000465
            Curator_confirmed: WBPerson712
        Recessive: Paper_evidence: WBPaper00000465
          Curator_confirmed: WBPerson712
        EQ_annotations: Life_stage: WBls:0000041 PATO:0000460 Paper_evidence: WBPaper00000465
                Curator_confirmed: WBPerson712
        Phenotype_assay: Temperature: 25C Paper_evidence: WBPaper00000465
              Curator_confirmed: WBPerson712
      WBPhenotype:0001517 Paper_evidence: WBPaper00000465
        Curator_confirmed: WBPerson712
        Remark: Annulae are slightly deranged. Paper_evidence: WBPaper00000465
            Curator_confirmed: WBPerson712
        Recessive: Paper_evidence: WBPaper00000465
          Curator_confirmed: WBPerson712
        EQ_annotations: Life_stage: WBls:0000041 PATO:0000460 Paper_evidence: WBPaper00000465
                Curator_confirmed: WBPerson712
        Phenotype_assay: Temperature: 25C Paper_evidence: WBPaper00000465
              Curator_confirmed: WBPerson712
    Phenotype_not_observed (6)
  Reference: WBPaper00015014
    WBPaper00015337
    WBPaper00014620
    WBPaper00015329
    WBPaper00014564
    WBPaper00040284
    WBPaper00029020
    WBPaper00027319
    WBPaper00027311
    WBPaper00027239
    WBPaper00014182
    WBPaper00015097
    WBPaper00026305
    WBPaper00022015
    WBPaper00013733
    WBPaper00014289
    WBPaper00014292
    WBPaper00005747
    WBPaper00015201
    WBPaper00015492
    WBPaper00012681
    WBPaper00015650
    WBPaper00014100
    WBPaper00014351
    WBPaper00000465
    WBPaper00014840
    WBPaper00000914
    WBPaper00014711
    WBPaper00014022
    WBPaper00014099
    WBPaper00021803
    WBPaper00012304
    WBPaper00014708
    WBPaper00018100
    WBPaper00005927
    WBPaper00011726
    WBPaper00015884
    WBPaper00023275
    WBPaper00026198
    WBPaper00018680
    WBPaper00011790
    WBPaper00014424
    WBPaper00014494
    WBPaper00014712
    WBPaper00014170
    WBPaper00021708
    WBPaper00022155
    WBPaper00014488
    WBPaper00014495
    WBPaper00051549
    WBPaper00061052
    WBPaper00061997
    WBPaper00062032
    WBPaper00065017
    WBPaper00065007
    WBPaper00064979
    WBPaper00065312
    WBPaper00065313
    WBPaper00065315
    WBPaper00065317
    WBPaper00065802
    WBPaper00065803
    WBPaper00065813
    WBPaper00065829
    WBPaper00065833
    WBPaper00065838
    WBPaper00065845
    WBPaper00065747
    WBPaper00065754
    WBPaper00065768
    WBPaper00065979
    WBPaper00065993
    WBPaper00065995
    WBPaper00066037
  Remark: Variation stub/paper connection generated from the May 2021 NN VFP dataset.
    Created by WBPerson51134 from the NN_VFP_triage_pipeline
  Method: Substitution_allele