WormBase Tree Display for Variation: WBVar00143763
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WBVar00143763 | Evidence | Paper_evidence | WBPaper00004136 | ||
---|---|---|---|---|---|
Name | Public_name | e1124 | |||
Other_name | CE32386:p.Gln2233Ter | ||||
F18C12.1.1:c.6697C>T | |||||
HGVSg | CHROMOSOME_I:g.8071718G>A | ||||
Sequence_details | SMap | S_parent | Sequence | F18C12 | |
Flanking_sequences | ctgataacgggaacaactggatgtggaaaa | aacagcttctgaagcattgcttccagaatg | |||
Mapping_target | F18C12 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004248 | ||||
Laboratory | CB | ||||
Status | Live | ||||
Affects | Gene | WBGene00000485 | |||
Transcript | F18C12.1.1 | VEP_consequence | stop_gained | ||
VEP_impact | HIGH | ||||
HGVSc | F18C12.1.1:c.6697C>T | ||||
HGVSp | CE32386:p.Gln2233Ter | ||||
cDNA_position | 6697 | ||||
CDS_position | 6697 | ||||
Protein_position | 2233 | ||||
Exon_number | 27/49 | ||||
Codon_change | Caa/Taa | ||||
Amino_acid_change | Q/* | ||||
Interactor | WBInteraction000502224 | ||||
WBInteraction000520981 | |||||
WBInteraction000554845 | |||||
Genetics | Interpolated_map_position | I | 2.44242 | ||
Mapping_data | In_2_point | 787 | |||
2590 | |||||
In_multi_point | 719 | ||||
1698 | |||||
In_pos_neg_data | 8303 | ||||
8304 | |||||
8305 | |||||
8306 | |||||
Description (2) | |||||
Reference | WBPaper00041842 | ||||
WBPaper00000932 | |||||
WBPaper00031936 | |||||
WBPaper00027116 | |||||
WBPaper00028448 | |||||
WBPaper00029016 | |||||
WBPaper00006052 | |||||
WBPaper00002087 | |||||
WBPaper00001786 | |||||
WBPaper00000214 | |||||
WBPaper00031959 | |||||
WBPaper00017262 | |||||
WBPaper00014508 | |||||
WBPaper00028386 | |||||
WBPaper00019253 | |||||
WBPaper00003680 | |||||
WBPaper00016004 | |||||
WBPaper00000552 | |||||
WBPaper00003582 | |||||
WBPaper00046527 | |||||
WBPaper00055368 | |||||
Method | Substitution_allele |