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WormBase Tree Display for Variation: WBVar00089700

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Name Class

WBVar00089700EvidencePaper_evidenceWBPaper00002413
NamePublic_namen717
Other_nameC48D1.2b.1:c.562-1G>A
C48D1.2a.1:c.1210-1G>A
HGVSgCHROMOSOME_IV:g.13200009C>T
Sequence_detailsSMapS_parentSequenceC48D1
Flanking_sequencestttttaaatgataattaataaatttttgcacaagtgtggagaaagaagccgagccaagct
Mapping_targetC48D1
Type_of_mutationSubstitutiongaPaper_evidenceWBPaper00002413
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00005600
WBStrain00005836
WBStrain00026860
WBStrain00026968
WBStrain00027213
WBStrain00027223
WBStrain00027232
WBStrain00027287
WBStrain00040671
WBStrain00040674
LaboratoryMT
StatusLive
AffectsGeneWBGene00000417
TranscriptC48D1.2a.1VEP_consequencesplice_acceptor_variant
VEP_impactHIGH
HGVScC48D1.2a.1:c.1210-1G>A
Intron_number7/9
C48D1.2b.1VEP_consequencesplice_acceptor_variant
VEP_impactHIGH
HGVScC48D1.2b.1:c.562-1G>A
Intron_number3/4
Interactor (29)
GeneticsInterpolated_map_positionIV8.46245
Mapping_dataIn_multi_point689
690
896
In_pos_neg_data831
DescriptionPhenotype (15)
Phenotype_not_observed (9)
ReferenceWBPaper00016474
WBPaper00016510
WBPaper00038332
WBPaper00038432
WBPaper00027269
WBPaper00016118
WBPaper00011119
WBPaper00016322
WBPaper00011213
WBPaper00030973
WBPaper00014787
WBPaper00028561
WBPaper00014971
WBPaper00027700
WBPaper00022236
WBPaper00004574
WBPaper00023668
WBPaper00017942
WBPaper00010182
WBPaper00028759
WBPaper00023380
WBPaper00019525
WBPaper00031571
WBPaper00032243
WBPaper00033433
WBPaper00035076
WBPaper00010325
WBPaper00044144
WBPaper00046527
WBPaper00050421
WBPaper00051461
WBPaper00053621
WBPaper00065007
MethodSubstitution_allele