WormBase Tree Display for Variation: WBVar00143000
expand all nodes | collapse all nodes | view schema
WBVar00143000 | Evidence | Paper_evidence | WBPaper00003350 | ||
---|---|---|---|---|---|
Name | Public_name | e156 | |||
Other_name | Y37D8A.23a.1:c.1148G>A | ||||
Y37D8A.23c.1:c.923G>A | |||||
CE20226:p.Trp383Ter | |||||
Y37D8A.23b.1:c.1148G>A | |||||
CE32012:p.Trp308Ter | |||||
CE31832:p.Trp383Ter | |||||
HGVSg | CHROMOSOME_III:g.12948395G>A | ||||
Sequence_details (5) | |||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain (22) | |||||
Laboratory | CB | ||||
OJ | |||||
Status | Live | ||||
Affects | Gene | WBGene00006762 | |||
Transcript | Y37D8A.23c.1 | VEP_consequence | stop_gained | ||
VEP_impact | HIGH | ||||
HGVSc | Y37D8A.23c.1:c.923G>A | ||||
HGVSp | CE32012:p.Trp308Ter | ||||
cDNA_position | 923 | ||||
CDS_position | 923 | ||||
Protein_position | 308 | ||||
Exon_number | 4/6 | ||||
Codon_change | tGg/tAg | ||||
Amino_acid_change | W/* | ||||
Y37D8A.23b.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | ||||
HGVSc | Y37D8A.23b.1:c.1148G>A | ||||
HGVSp | CE31832:p.Trp383Ter | ||||
cDNA_position | 1148 | ||||
CDS_position | 1148 | ||||
Protein_position | 383 | ||||
Exon_number | 6/9 | ||||
Codon_change | tGg/tAg | ||||
Amino_acid_change | W/* | ||||
Y37D8A.23a.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | ||||
HGVSc | Y37D8A.23a.1:c.1148G>A | ||||
HGVSp | CE20226:p.Trp383Ter | ||||
cDNA_position | 1158 | ||||
CDS_position | 1148 | ||||
Protein_position | 383 | ||||
Exon_number | 7/10 | ||||
Codon_change | tGg/tAg | ||||
Amino_acid_change | W/* | ||||
Interactor | WBInteraction000001428 | ||||
WBInteraction000517365 | |||||
WBInteraction000517573 | |||||
WBInteraction000555296 | |||||
WBInteraction000558065 | |||||
WBInteraction000558066 | |||||
Genetics | Interpolated_map_position | III | 20.6631 | ||
Mapping_data | In_2_point | 57 | |||
68 | |||||
78 | |||||
6019 | |||||
6109 | |||||
7009 | |||||
7010 | |||||
In_multi_point (32) | |||||
In_pos_neg_data | 354 | ||||
Description (2) | |||||
Disease_info | Models_disease | DOID:1826 | |||
Models_disease_in_annotation | WBDOannot00000549 | ||||
Reference (23) | |||||
Method | Substitution_allele |