WormBase Tree Display for Variation: WBVar01451543
expand all nodes | collapse all nodes | view schema
WBVar01451543 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01451543 | ||||
Other_name | Y54G2A.1.1:c.163-57T>A | |||||
HGVSg | CHROMOSOME_IV:g.3021799T>A | |||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||
Flanking_sequences | AATAATAGCCTCCGCCTCTATTTGGGCTTC | TTTGGGTATTCCATTTTTTATTCTTATTAA | ||||
Mapping_target | Y54G2A | |||||
Type_of_mutation | Substitution | t | a | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00004597 | From_analysis | WGS_Andersen | |||
WBStrain00006363 | From_analysis | WGS_Andersen | ||||
WBStrain00023311 | From_analysis | WGS_Andersen | ||||
WBStrain00033541 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193337200 | ||
dbSNP_ss | ss | 295513119 | ||||
Status | Live | |||||
Affects | Gene | WBGene00003008 | ||||
Transcript | Y54G2A.1.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | Y54G2A.1.1:c.163-57T>A | |||||
Intron_number | 3/4 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |