WormBase Tree Display for Variation: WBVar00248918
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WBVar00248918 | Evidence | Paper_evidence | WBPaper00002227 | ||||||
---|---|---|---|---|---|---|---|---|---|
Name (3) | |||||||||
Sequence_details | SMap | S_parent | Sequence | M02A10 | |||||
Flanking_sequences | catgcacacgtcctggacaatgggcaatag | atacgtagctccggatggaaagatttatca | |||||||
Mapping_target | M02A10 | ||||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00002227 | ||||
SeqStatus | Sequenced | ||||||||
Variation_type | Allele | ||||||||
Origin | Species | Caenorhabditis elegans | |||||||
Strain | WBStrain00030829 | ||||||||
Laboratory | PS | ||||||||
Status | Live | ||||||||
Affects | Gene | WBGene00004829 | |||||||
Transcript | M02A10.3b.1 (12) | ||||||||
M02A10.3c.1 | VEP_consequence | missense_variant | |||||||
VEP_impact | MODERATE | ||||||||
SIFT | 0 | deleterious_low_confidence | |||||||
PolyPhen | 0.999 | probably_damaging | |||||||
HGVSc | M02A10.3c.1:c.893G>A | ||||||||
HGVSp | CE37131:p.Gly298Glu | ||||||||
cDNA_position | 957 | ||||||||
CDS_position | 893 | ||||||||
Protein_position | 298 | ||||||||
Exon_number | 7/11 | ||||||||
Codon_change | gGa/gAa | ||||||||
Amino_acid_change | G/E | ||||||||
M02A10.3a.1 (12) | |||||||||
Genetics | Interpolated_map_position | X | -19.5052 | ||||||
Description | Phenotype | WBPhenotype:0000699 | Paper_evidence | WBPaper00002148 | |||||
Curator_confirmed | WBPerson625 | ||||||||
Remark | suppresses vulvaless phenotype | Paper_evidence | WBPaper00002148 | ||||||
Curator_confirmed | WBPerson625 | ||||||||
EQ_annotations | Anatomy_term | WBbt:0006748 | PATO:0000460 | Paper_evidence | WBPaper00002148 | ||||
Curator_confirmed | WBPerson625 | ||||||||
Reference | WBPaper00014707 | ||||||||
WBPaper00022151 | |||||||||
WBPaper00002148 | |||||||||
Method | Substitution_allele |