WormBase Tree Display for Variation: WBVar00143781
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WBVar00143781 | Evidence | Paper_evidence | WBPaper00000779 | ||
---|---|---|---|---|---|
Name | Public_name | e1152 | |||
Other_name | CE09349:p.Gly852_Lys853delinsArgMet | ||||
F11C3.3.1:c.2554_2558delinsAGAAT | |||||
HGVSg | CHROMOSOME_I:g.14859670_14859674delinsATTCT | ||||
Sequence_details | SMap | S_parent | Sequence | F11C3 | |
Flanking_sequences | tacggaaaggtcaagccaatgctcaaggcc | ggaagccgaggagctcgagaagatcaacga | |||
Mapping_target | F11C3 | ||||
Type_of_mutation | Substitution | ggaaa | agaat | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004255 | ||||
WBStrain00033515 | |||||
Laboratory | CB | ||||
Status | Live | ||||
Affects | Gene | WBGene00006789 | |||
Transcript | F11C3.3.1 | VEP_consequence | missense_variant | ||
VEP_impact | MODERATE | ||||
HGVSc | F11C3.3.1:c.2554_2558delinsAGAAT | ||||
HGVSp | CE09349:p.Gly852_Lys853delinsArgMet | ||||
cDNA_position | 2586-2590 | ||||
CDS_position | 2554-2558 | ||||
Protein_position | 852-853 | ||||
Exon_number | 7/11 | ||||
Codon_change | GGAAAg/AGAATg | ||||
Amino_acid_change | GK/RM | ||||
Isolation | Mutagen | EMS | Paper_evidence | WBPaper00000779 | |
Genetics | Interpolated_map_position | I | 27.9607 | ||
Mapping_data | In_2_point | 207 | |||
208 | |||||
In_multi_point | 246 | ||||
In_pos_neg_data | 4787 | ||||
4802 | |||||
4817 | |||||
4832 | |||||
4847 | |||||
4862 | |||||
4877 | |||||
4892 | |||||
4907 | |||||
4922 | |||||
4937 | |||||
4952 | |||||
4967 | |||||
Description | Phenotype (2) | ||||
Reference | WBPaper00027255 | ||||
WBPaper00016578 | |||||
WBPaper00016042 | |||||
Remark | e1152 comrpises a total of two base substitutions in two separate codons. | Paper_evidence | WBPaper00000779 | ||
Method | Substitution_allele |