WormBase Tree Display for Variation: WBVar00143035
expand all nodes | collapse all nodes | view schema
WBVar00143035 | Evidence | Paper_evidence | WBPaper00004275 | ||
---|---|---|---|---|---|
Name | Public_name | e205 | |||
Other_name | JC8.10b.1:c.2708G>A | ||||
JC8.10a.1:c.2690G>A | |||||
CE29050:p.Trp903Ter | |||||
CE28239:p.Trp897Ter | |||||
HGVSg | CHROMOSOME_IV:g.13263617C>T | ||||
Sequence_details | SMap | S_parent | Sequence | JC8 | |
Flanking_sequences | agctgagcaaattcgacgatggcgatctat | gattgtactgaatagtggagaaatggcatt | |||
Mapping_target | JC8 | ||||
Type_of_mutation | Substitution | g | a | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004127 | ||||
WBStrain00005395 | |||||
WBStrain00006188 | |||||
WBStrain00008016 | |||||
WBStrain00026968 | |||||
WBStrain00027061 | |||||
Laboratory | CB | ||||
Status | Live | ||||
Affects | Gene | WBGene00006763 | |||
Transcript | JC8.10b.1 | VEP_consequence | stop_gained | ||
VEP_impact | HIGH | ||||
HGVSc | JC8.10b.1:c.2708G>A | ||||
HGVSp | CE29050:p.Trp903Ter | ||||
cDNA_position | 2713 | ||||
CDS_position | 2708 | ||||
Protein_position | 903 | ||||
Exon_number | 10/12 | ||||
Codon_change | tGg/tAg | ||||
Amino_acid_change | W/* | ||||
JC8.10a.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | ||||
HGVSc | JC8.10a.1:c.2690G>A | ||||
HGVSp | CE28239:p.Trp897Ter | ||||
cDNA_position | 2693 | ||||
CDS_position | 2690 | ||||
Protein_position | 897 | ||||
Exon_number | 9/11 | ||||
Codon_change | tGg/tAg | ||||
Amino_acid_change | W/* | ||||
Interactor | WBInteraction000517566 | ||||
WBInteraction000517568 | |||||
Genetics | Interpolated_map_position | IV | 8.51097 | ||
Mapping_data | In_2_point | 116 | |||
122 | |||||
439 | |||||
In_multi_point | 128 | ||||
129 | |||||
690 | |||||
896 | |||||
1119 | |||||
1215 | |||||
1613 | |||||
1622 | |||||
1830 | |||||
2271 | |||||
2272 | |||||
3253 | |||||
In_pos_neg_data | 832 | ||||
4678 | |||||
4685 | |||||
4687 | |||||
Description (2) | |||||
Reference (12) | |||||
Method | Substitution_allele |