WormBase Tree Display for Variation: WBVar02134414
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WBVar02134414 | Evidence | Paper_evidence | WBPaper00045317 | |||
---|---|---|---|---|---|---|
Name | Public_name | h10329 | ||||
Other_name (12) | ||||||
HGVSg | CHROMOSOME_IV:g.9436750G>A | |||||
Sequence_details | SMap | S_parent | Sequence | F59B8 | ||
Flanking_sequences | GACGTAATGCTCAACATTTTGATGTCAATGACGAAGGAAG | AGCCTCCGATGGGCCGCAGTTCGTCGCTCCTGCAAGTAAG | ||||
Mapping_target | CHROMOSOME_IV | |||||
Source_location | 200 | CHROMOSOME_IV | 9436727 | 9436727 | ||
Type_of_mutation | Substitution | G | A | |||
SeqStatus | Sequenced | |||||
Variation_type | Allele | |||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023777 | |||||
Laboratory | KR | |||||
Analysis | WGS_Rose | |||||
Status | Live | |||||
Affects | Gene | WBGene00010316 | ||||
Transcript | F59B8.1c.1 (12) | |||||
F59B8.1a.3 (12) | ||||||
F59B8.1a.1 (12) | ||||||
F59B8.1a.2 (12) | ||||||
F59B8.1a.5 (12) | ||||||
F59B8.1a.4 (12) | ||||||
F59B8.1e.1 (12) | ||||||
F59B8.1d.1 | VEP_consequence | missense_variant | ||||
VEP_impact | MODERATE | |||||
SIFT | 0.38 | tolerated | ||||
PolyPhen | 0.999 | probably_damaging | ||||
HGVSc | F59B8.1d.1:c.56G>A | |||||
HGVSp | CE49947:p.Gly19Glu | |||||
cDNA_position | 56 | |||||
CDS_position | 56 | |||||
Protein_position | 19 | |||||
Exon_number | 2/8 | |||||
Codon_change | gGa/gAa | |||||
Amino_acid_change | G/E | |||||
Reference | WBPaper00040589 | |||||
WBPaper00000975 | ||||||
WBPaper00003985 | ||||||
WBPaper00000699 | ||||||
WBPaper00045317 | ||||||
Method | WGS_Rose |