WormBase Tree Display for Variation: WBVar00241795
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WBVar00241795 | Evidence | Paper_evidence | WBPaper00006063 | |||
---|---|---|---|---|---|---|
Name | Public_name | s287 | ||||
Other_name | F46E10.9.1:c.3G>A | |||||
CE20819:p.Met1? | ||||||
F46E10.9.2:c.3G>A | ||||||
HGVSg | CHROMOSOME_V:g.6513343C>T | |||||
Sequence_details | SMap | S_parent | Sequence | F46E10 | ||
Flanking_sequences | gacatctataaaacaagtcaattccagaat | ctgctccgattgctcgccgtgctcggactt | ||||
Mapping_target | F46E10 | |||||
Type_of_mutation | Substitution | g | a | |||
SeqStatus | Sequenced | |||||
Variation_type | Allele | |||||
Origin (3) | ||||||
Affects | Gene | WBGene00001073 | ||||
Transcript | F46E10.9.2 (12) | |||||
F46E10.9.1 | VEP_consequence | start_lost | ||||
VEP_impact | HIGH | |||||
SIFT | 0.44 | tolerated_low_confidence | ||||
PolyPhen | 0 | unknown | ||||
HGVSc | F46E10.9.1:c.3G>A | |||||
HGVSp | CE20819:p.Met1? | |||||
cDNA_position | 4 | |||||
CDS_position | 3 | |||||
Protein_position | 1 | |||||
Exon_number | 2/8 | |||||
Codon_change | atG/atA | |||||
Amino_acid_change | M/I | |||||
Genetics | Interpolated_map_position | V | -0.000802336 | |||
Marked_rearrangement | eT1[dpy-11(s287)] | |||||
Reference | WBPaper00029020 | |||||
WBPaper00006063 | ||||||
Method | Substitution_allele |