WormBase Tree Display for Variation: WBVar00074563
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WBVar00074563 | Name | Public_name | WBVar00074563 | |||
---|---|---|---|---|---|---|
Other_name | haw98923 | |||||
cewivar00268294 | ||||||
F39H12.1.1:c.421A>G | ||||||
CE35527:p.Thr141Ala | ||||||
HGVSg | CHROMOSOME_X:g.835873A>G | |||||
Sequence_details | SMap | S_parent | Sequence | F39H12 | ||
Flanking_sequences | agctccagttgctgtgccagaagta | cattaccaaatcctgaagaaattct | ||||
Mapping_target | F39H12 | |||||
Type_of_mutation | Substitution | A | G | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Predicted_SNP | ||||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||
WGS_Hawaiian_Waterston | ||||||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | ||||
Laboratory | RW | |||||
Person | WBPerson1562 | |||||
Analysis | WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | ||||||
Status | Live | |||||
Affects | Gene | WBGene00018212 | ||||
Transcript | F39H12.1.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | |||||
SIFT | 0.8 | tolerated_low_confidence | ||||
PolyPhen | 0.003 | benign | ||||
HGVSc | F39H12.1.1:c.421A>G | |||||
HGVSp | CE35527:p.Thr141Ala | |||||
cDNA_position | 432 | |||||
CDS_position | 421 | |||||
Protein_position | 141 | |||||
Exon_number | 5/11 | |||||
Codon_change | Aca/Gca | |||||
Amino_acid_change | T/A | |||||
Remark | [20081124 db] this Variation was previously named hw98923 | |||||
Method | WGS_Hawaiian_Waterston |