WormBase Tree Display for Variation: WBVar00220706
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WBVar00220706 | Evidence | Paper_evidence | WBPaper00037807 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar00220706 | ||||
Other_name | pas32482 | |||||
cewivar00010564 | ||||||
CE44036:p.Ala22Gly | ||||||
F19B10.4.1:c.65C>G | ||||||
HGVSg | CHROMOSOME_II:g.3660250C>G | |||||
Sequence_details | SMap | S_parent | Sequence | F19B10 | ||
Flanking_sequences | actaattcaatctgaaaattttaaaattctgaaatttctgttacaattatcttgccatttcttttttcttctaaatattttttccccaatatttattgattttttcttcacaatttttttttcagctcacaaaaatgtccgatctttcacagctcgaaatcaactgcgcaaaatctaccggtaagtcttttaaaaatcaatttactaggttttccatggaaggtaggaacggtttcagggcctggtacctgcctggaatttttatgctcattgatatttcagaactggctcagctagaag | cgtacttcaagacaaagttcacacacttctagacgacccaaatcaagagtacaggagaaattgggagcttcagctcattgaaaacaccaaggctagagatgcagctctcgatgaggcaaaattctggaaatccgaatttcggcgcgttgagagactgttccaagatatgagaaaggaatacaagtcaaacgatgaccgggaagacgaatttcttgacaaggcgatgaaagaattggatgaaaatagtctgaaaattggaaaagctcaaatgcaaagttgtttacaaaatggtgagtttta | ||||
Mapping_target | F19B10 | |||||
Type_of_mutation | Substitution | C | G | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Predicted_SNP | ||||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (30) | ||||||
Laboratory | AX | |||||
Person | WBPerson6900 | |||||
Analysis | WGS_Pasadena_Quinlan | |||||
WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | ||||||
History | Acquires_merge | WBVar01237076 | ||||
WBVar01303266 | ||||||
Status | Live | |||||
Affects | Gene | WBGene00017586 | ||||
Transcript | F19B10.4.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | |||||
PolyPhen | 0 | unknown | ||||
HGVSc | F19B10.4.1:c.65C>G | |||||
HGVSp | CE44036:p.Ala22Gly | |||||
cDNA_position | 73 | |||||
CDS_position | 65 | |||||
Protein_position | 22 | |||||
Exon_number | 3/7 | |||||
Codon_change | gCc/gGc | |||||
Amino_acid_change | A/G | |||||
Reference | WBPaper00037807 | |||||
Method | WGS_Pasadena_Quinlan |