WormBase Tree Display for Variation: WBVar00241711
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WBVar00241711 | Evidence | Paper_evidence | WBPaper00000779 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | s95 | |||||
Other_name | CE09349:p.Gly115Arg | ||||||
F11C3.3.1:c.343G>A | |||||||
HGVSg | CHROMOSOME_I:g.14862017C>T | ||||||
Sequence_details | SMap | S_parent | Sequence | F11C3 | |||
Flanking_sequences | ctagaatgtttcctatttcagacctactcc | gacttttctgcgttgtcatcaacccataca | |||||
Mapping_target | F11C3 | ||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00000779 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain (3) | |||||||
Laboratory | BC | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00006789 | |||||
Transcript | F11C3.3.1 | VEP_consequence | missense_variant | ||||
VEP_impact | MODERATE | ||||||
SIFT | 0 | deleterious | |||||
PolyPhen | 1 | probably_damaging | |||||
HGVSc | F11C3.3.1:c.343G>A | ||||||
HGVSp | CE09349:p.Gly115Arg | ||||||
cDNA_position | 375 | ||||||
CDS_position | 343 | ||||||
Protein_position | 115 | ||||||
Exon_number | 5/11 | ||||||
Codon_change | Gga/Aga | ||||||
Amino_acid_change | G/R | ||||||
Interactor | WBInteraction000500073 | ||||||
WBInteraction000500074 | |||||||
WBInteraction000500075 | |||||||
WBInteraction000500076 | |||||||
Isolation | Mutagen | EMS | Paper_evidence | WBPaper00000779 | |||
Genetics | Interpolated_map_position | I | 27.9623 | ||||
Reference | WBPaper00023797 | ||||||
WBPaper00016376 | |||||||
WBPaper00000571 | |||||||
WBPaper00017410 | |||||||
WBPaper00016444 | |||||||
WBPaper00016434 | |||||||
WBPaper00023723 | |||||||
WBPaper00018219 | |||||||
WBPaper00022936 | |||||||
Method | Substitution_allele |