WormBase Tree Display for Variation: WBVar02134782
expand all nodes | collapse all nodes | view schema
WBVar02134782 | Evidence | Paper_evidence | WBPaper00045317 | |||
---|---|---|---|---|---|---|
Name | Public_name | h7809 | ||||
Other_name | F11A10.6a.2:c.206G>A | |||||
F11A10.6a.1:c.206G>A | ||||||
CE23643:p.Ser69Asn | ||||||
HGVSg | CHROMOSOME_IV:g.12088270C>T | |||||
Sequence_details | SMap | S_parent | Sequence | F11A10 | ||
Flanking_sequences | TGTCCACAGAACGTCGAGTACATTGTGACCGCAGAATGTG | TTGTCGCGATACGCCAAAGCTGGAAAAATGAAATTGTTTC | ||||
Mapping_target | CHROMOSOME_IV | |||||
Source_location | 200 | CHROMOSOME_IV | 12088240 | 12088240 | ||
Type_of_mutation | Substitution | C | T | |||
SeqStatus | Sequenced | |||||
Variation_type | Allele | |||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023705 | |||||
Laboratory | KR | |||||
Analysis | WGS_Rose | |||||
Status | Live | |||||
Affects | Gene | WBGene00008687 | ||||
Transcript | F11A10.6a.2 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | |||||
SIFT | 1 | tolerated | ||||
PolyPhen | 0.34 | benign | ||||
HGVSc | F11A10.6a.2:c.206G>A | |||||
HGVSp | CE23643:p.Ser69Asn | |||||
cDNA_position | 727 | |||||
CDS_position | 206 | |||||
Protein_position | 69 | |||||
Exon_number | 5/9 | |||||
Codon_change | aGc/aAc | |||||
Amino_acid_change | S/N | |||||
F11A10.6a.1 (12) | ||||||
Reference | WBPaper00040589 | |||||
WBPaper00000975 | ||||||
WBPaper00003985 | ||||||
WBPaper00000699 | ||||||
WBPaper00045317 | ||||||
Method | WGS_Rose |