WormBase Tree Display for Variation: WBVar00089068
expand all nodes | collapse all nodes | view schema
WBVar00089068 | Evidence | Paper_evidence | WBPaper00002004 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | mn151 | |||||
Other_name | CE04335:p.Gly589Arg | ||||||
F01G12.5b.1:c.1765G>A | |||||||
F01G12.5a.1:c.1762G>A | |||||||
CE04334:p.Gly588Arg | |||||||
HGVSg | CHROMOSOME_X:g.16385104C>T | ||||||
Sequence_details | SMap | S_parent | Sequence | F01G12 | |||
Flanking_sequences | ccgggaccagcaggtcgcccaggatctcca | gaccaccaggacaagacggtttcccaggac | |||||
Mapping_target | F01G12 | ||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00002004 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Laboratory | SP | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00002280 | |||||
Transcript | F01G12.5b.1 | VEP_consequence | missense_variant | ||||
VEP_impact | MODERATE | ||||||
SIFT | 0 | deleterious | |||||
PolyPhen | 0 | unknown | |||||
HGVSc | F01G12.5b.1:c.1765G>A | ||||||
HGVSp | CE04335:p.Gly589Arg | ||||||
cDNA_position | 1765 | ||||||
CDS_position | 1765 | ||||||
Protein_position | 589 | ||||||
Exon_number | 12/18 | ||||||
Codon_change | Gga/Aga | ||||||
Amino_acid_change | G/R | ||||||
F01G12.5a.1 (12) | |||||||
Isolation | Mutagen | EMS | Paper_evidence | WBPaper00002004 | |||
Genetics | Interpolated_map_position | X | 23.9208 | ||||
Reference | WBPaper00002004 | ||||||
Method | Substitution_allele |