WormBase Tree Display for Variation: WBVar00089286
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WBVar00089286 | Evidence | Paper_evidence | WBPaper00004977 | |||
---|---|---|---|---|---|---|
Name | Public_name | n150 | ||||
Other_name | n150ts | |||||
CE45708:p.Gly469Glu | ||||||
CE08940:p.Gly594Glu | ||||||
C51E3.7c.1:c.1406G>A | ||||||
C51E3.7a.1:c.1781G>A | ||||||
HGVSg | CHROMOSOME_V:g.10170178C>T | |||||
Sequence_details | SMap | S_parent | Sequence | C51E3 | ||
Flanking_sequences | caacacacacatggggagagaatccaacag | aaaatggagacttgtcgccagattccaagt | ||||
Mapping_target | C51E3 | |||||
Type_of_mutation | Substitution | g | a | |||
SeqStatus | Sequenced | |||||
Variation_type | Allele | |||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00026704 | |||||
WBStrain00056259 | ||||||
Laboratory | MT | |||||
ZAS | ||||||
Status | Live | |||||
Affects | Gene | WBGene00001172 | ||||
Transcript | C51E3.7a.1 (12) | |||||
C51E3.7c.1 | VEP_consequence | missense_variant | ||||
VEP_impact | MODERATE | |||||
SIFT | 0 | deleterious | ||||
PolyPhen | 1 | probably_damaging | ||||
HGVSc | C51E3.7c.1:c.1406G>A | |||||
HGVSp | CE45708:p.Gly469Glu | |||||
cDNA_position | 1406 | |||||
CDS_position | 1406 | |||||
Protein_position | 469 | |||||
Exon_number | 6/7 | |||||
Codon_change | gGa/gAa | |||||
Amino_acid_change | G/E | |||||
Genetics | Interpolated_map_position | V | 2.28547 | |||
Mapping_data | In_2_point | 715 | ||||
In_multi_point | 329 | |||||
608 | ||||||
609 | ||||||
797 | ||||||
953 | ||||||
In_pos_neg_data | 1732 | |||||
1733 | ||||||
1734 | ||||||
1741 | ||||||
Description (2) | ||||||
Reference | WBPaper00031936 | |||||
WBPaper00000635 | ||||||
WBPaper00029060 | ||||||
WBPaper00028958 | ||||||
WBPaper00048845 | ||||||
WBPaper00065754 | ||||||
Method | Substitution_allele |