WormBase Tree Display for Variation: WBVar00177300
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WBVar00177300 | Evidence | Paper_evidence | WBPaper00037807 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar00177300 | ||||
Other_name | haw30550 | |||||
cewivar00186799 | ||||||
CE38056:p.Thr285Ser | ||||||
C50E10.3.1:c.854C>G | ||||||
HGVSg | CHROMOSOME_II:g.12321534G>C | |||||
Sequence_details | SMap | S_parent | Sequence | C50E10 | ||
Flanking_sequences | attttcgaagcaataaatcaggaaa | tgtccaaagacggaacccactccaa | ||||
Mapping_target | C50E10 | |||||
Type_of_mutation | Substitution | G | C | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Predicted_SNP | ||||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | |||
WGS_Hawaiian_Waterston | ||||||
Million_mutation_project_reanalysis | ||||||
Laboratory | RW | |||||
AX | ||||||
Person | WBPerson1562 | |||||
Analysis | WGS_Hawaiian_Waterston | |||||
WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | ||||||
History | Acquires_merge | WBVar01378701 | ||||
Status | Live | |||||
Affects | Gene | WBGene00016827 | ||||
Transcript | C50E10.3.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | |||||
SIFT | 0.21 | tolerated | ||||
PolyPhen | 0.998 | probably_damaging | ||||
HGVSc | C50E10.3.1:c.854C>G | |||||
HGVSp | CE38056:p.Thr285Ser | |||||
cDNA_position | 854 | |||||
CDS_position | 854 | |||||
Protein_position | 285 | |||||
Exon_number | 2/3 | |||||
Codon_change | aCt/aGt | |||||
Amino_acid_change | T/S | |||||
Reference | WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw30550 | |||||
Method | WGS_Hawaiian_Waterston |