WormBase Tree Display for Variation: WBVar01501101
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WBVar01501101 | Name | Public_name | WBVar01501101 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00001681 | |||||||
C17H1.3.1:c.377T>C | ||||||||
CE15625:p.Val126Ala | ||||||||
HGVSg | CHROMOSOME_I:g.13105092T>C | |||||||
Sequence_details | SMap | S_parent | Sequence | C17H1 | ||||
Flanking_sequences | CCCACGAATCTGAGATGAAAAACTGCGAGG | GCAAATGGAGGCGATCAGACAGAAGGGTGA | ||||||
Mapping_target | C17H1 | |||||||
Source_location | 225 | CHROMOSOME_I | 13105081 | 13105081 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00007656 | ||||||
Transcript | C17H1.3.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
SIFT | 0.75 | tolerated_low_confidence | ||||||
PolyPhen | 0.009 | benign | ||||||
HGVSc | C17H1.3.1:c.377T>C | |||||||
HGVSp | CE15625:p.Val126Ala | |||||||
cDNA_position | 379 | |||||||
CDS_position | 377 | |||||||
Protein_position | 126 | |||||||
Exon_number | 5/9 | |||||||
Codon_change | gTg/gCg | |||||||
Amino_acid_change | V/A | |||||||
Method | WGS_Flibotte |