WormBase Tree Display for Variation: WBVar01501092
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WBVar01501092 | Name | Public_name | WBVar01501092 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00001672 | |||||||
CE15625:p.Glu79Ala | ||||||||
C17H1.3.1:c.236A>C | ||||||||
HGVSg | CHROMOSOME_I:g.13104576A>C | |||||||
Sequence_details | SMap | S_parent | Sequence | C17H1 | ||||
Flanking_sequences | CGAGATTGAAGCATGAGATGCTTTACAGAG | AAAACAAAAAGAGCATGAAGATGTAATGGG | ||||||
Mapping_target | C17H1 | |||||||
Source_location | 225 | CHROMOSOME_I | 13104565 | 13104565 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00007656 | ||||||
Transcript | C17H1.3.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
SIFT | 0.09 | tolerated_low_confidence | ||||||
PolyPhen | 0.944 | possibly_damaging | ||||||
HGVSc | C17H1.3.1:c.236A>C | |||||||
HGVSp | CE15625:p.Glu79Ala | |||||||
cDNA_position | 238 | |||||||
CDS_position | 236 | |||||||
Protein_position | 79 | |||||||
Exon_number | 4/9 | |||||||
Codon_change | gAa/gCa | |||||||
Amino_acid_change | E/A | |||||||
Method | WGS_Flibotte |